RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ZNF830Q96NB3 372 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ACO2Q99798 780 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 USP44Q9H0E7 712 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 KLHL11Q9NVR0 708 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 DDX43Q9NXZ2 648 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 LIMA1Q9UHB6 759 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 COQ6Q9Y2Z9 468 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PAXBP1Q9Y5B6 917 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PCDHA11Q9Y5I1 949 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ATP6V1DQ9Y5K8 247 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 MYH15Q9Y2K3 1946 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ATP8B3O60423 1300 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PSDA5PKW4 1024 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PI4K2BG5E9Z4 385 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 HNRNPRO43390 633 aaKnown RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 IFNB1P01574 187 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ASLP04424 464 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CASP6P55212 293 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 TOR1AIP1Q5JTV8 583 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 ATXN7L2Q5T6C5 722 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 BLOC1S2Q6QNY1 142 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 THNSL2Q86YJ6 484 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 P3H2Q8IVL5 708 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 TCAIMQ8N3R3 496 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 PTERQ96BW5 349 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 CAB39Q9Y376 341 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-209ENST00000508871 SNX8Q9Y5X2 465 aa4.17□□□□□ -1.74
NEDD4-209ENST00000508871 A0A1W2PRV1 198 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SNAP23O00161 211 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF609O15014 1411 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 H2AFYO75367 372 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 E2F6O75461 281 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 KRT19P08727 400 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 WEE2P0C1S8 567 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 FAM163BP0C2L3 166 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 MSX2P35548 267 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ATP5OP48047 213 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 GTF2A1P52655 376 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 HYAL2Q12891 473 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PLD1Q13393 1074 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CHRNA2Q15822 529 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 FYB2Q5VWT5 728 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ALKBH5Q6P6C2 394 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SLC9B2Q86UD5 537 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 WHAMMQ8TF30 809 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 IFIH1Q9BYX4 1025 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TRAV34A0A0B4J273 112 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CKBP12277 381 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TKTL1P51854 596 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CAPZA1P52907 286 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RASIP1Q5U651 963 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 YOD1Q5VVQ6 348 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TOGARAM2Q6ZUX3 1019 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TBC1D1Q86TI0 1168 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 VPS36Q86VN1 386 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 UNC93B1Q9H1C4 597 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RANBP17Q9H2T7 1088 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ECT2Q9H8V3 914 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CNOT7Q9UIV1 285 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CNTNAP4Q9C0A0 1308 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SYNRGQ9UMZ2 1314 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 BNIP3LO60238 219 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PLOD3O60568 738 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CRTAMO95727 393 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 HEXBP07686 556 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 HMBSP08397 361 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 GRM2Q14416 872 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 KRT72Q14CN4 511 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CRY1Q16526 586 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 FAM196AQ6ZSG2 479 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 OTOP3Q7RTS5 596 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TBC1D21Q8IYX1 336 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TUBGCP3Q96CW5 907 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 FEM1CQ96JP0 617 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CAPS2Q9BXY5 557 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SAYSD1Q9NPB0 183 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SLC13A4Q9UKG4 626 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 NR2E3Q9Y5X4 410 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 CHD4Q14839 1912 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 KCNQ3O43525 872 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ADCY3O60266 1144 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 KLHL41O60662 606 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 SOAT1P35610 550 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 GJA9P57773 515 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 LAPTM5Q13571 262 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 GCKRQ14397 625 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PPA1Q15181 289 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 RABEP1Q15276 862 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 PGS1Q32NB8 556 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 MAJINQ3KP22 176 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 C10orf76Q5T2E6 689 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 KRT80Q6KB66 452 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TNPO1Q92973 898 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 NCLNQ969V3 563 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 FAM193BQ96PV7 902 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 TACO1Q9BSH4 297 aaKnown RBP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.16□□□□□ -1.74
NEDD4-209ENST00000508871 NACAP1Q9BZK3 213 aa4.16□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF700Q9H0M5 742 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms