RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PTPRJQ12913 1337 aa11.78□□□□□ -0.52
SH3RF1-203ENST00000508685 EXTL3O43909 919 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 MTA2O94776 668 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 HARSP12081 509 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 GZMAP12544 262 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 ABCD1P33897 745 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 LAMTOR4Q0VGL1 99 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 CYP4F22Q6NT55 531 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 GPR142Q7Z601 462 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 FBXL13Q8NEE6 735 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 TMC2Q8TDI7 906 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 PSPC1Q8WXF1 523 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 ZNF516Q92618 1163 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 PI4K2AQ9BTU6 479 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 TMEM109Q9BVC6 243 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 SEPT11Q9NVA2 429 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 RAB20Q9NX57 234 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 TAS2R14Q9NYV8 317 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 BCCIPQ9P287 314 aaKnown RBP eCLIP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 COQ4Q9Y3A0 265 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 IVNS1ABPQ9Y6Y0 642 aa11.77□□□□□ -0.52
SH3RF1-203ENST00000508685 HTTP42858 3142 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 PHF2O75151 1096 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 PIGRP01833 764 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 ADCYAP1R1P41586 468 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 GPC3P51654 580 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 SEC24CP53992 1094 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 GPC5P78333 572 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 GRM1Q13255 1194 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 PTPROQ16827 1216 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 RNF187Q5TA31 235 aaPredicted RBP11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 RGMBQ6NW40 437 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 MAMDC4Q6UXC1 1216 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC50Q8IVM0 306 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 RNF149Q8NC42 400 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 MSTO1Q9BUK6 570 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 OSGEPQ9NPF4 335 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
SH3RF1-203ENST00000508685 A0A0B4J269 797 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 VGLL3A8MV65 326 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 MSCO60682 206 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 RTN2O75298 545 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ABCB4P21439 1286 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ZNF157P51786 506 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CLCN3P51790 818 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 PMS2P54278 862 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 PRPF4BQ13523 1007 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 DENND2CQ68D51 928 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 USP37Q86T82 979 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CACNA2D3Q8IZS8 1091 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 KCNN1Q92952 543 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 KATNBL1Q9H079 304 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 DPH5Q9H2P9 285 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ZDHHC18Q9NUE0 388 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 MTUS1Q9ULD2 1270 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ALG6Q9Y672 507 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ADGRA2Q96PE1 1338 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 STRNO43815 780 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 SGPL1O95470 568 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 GHRP10912 638 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 TNNI1P19237 187 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 IGBP1P78318 339 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ADCY2Q08462 1091 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 IFT88Q13099 833 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 IER5Q5VY09 327 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 DPP9Q86TI2 863 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 RPAINQ86UA6 219 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 SLC47A2Q86VL8 602 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 KAT2BQ92831 832 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 TATDN2Q93075 761 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms