RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 VPS41P49754 854 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 RPS6P62753 249 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 IL9RQ01113 521 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 NLRX1Q86UT6 975 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 GDAP1Q8TB36 358 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 BSNDQ8WZ55 320 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 CFAP57Q96MR6 1250 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 RMDN3Q96TC7 470 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 SENP7Q9BQF6 1050 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 PDCD2LQ9BRP1 358 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 DNAJC17Q9NVM6 304 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 PRKAG3Q9UGI9 489 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 NAALADL1Q9UQQ1 740 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 TESPA1A2RU30 521 aaPredicted RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 NDC80O14777 642 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 EXTL3O43909 919 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 SKIV2L2P42285 1042 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 PIK3CAP42336 1068 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 CLDN10P78369 228 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 CCDC15Q0P6D6 951 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 ACVR2BQ13705 512 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 MTFR1Q15390 333 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 RNF43Q68DV7 783 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 GSTA5Q7RTV2 222 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 SRRM1Q8IYB3 904 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 ZCCHC9Q8N567 271 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 KLHL29Q96CT2 875 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 FAM212AQ96EL1 285 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 TTC25Q96NG3 672 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 FNBP1Q96RU3 617 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 HEMGNQ9BXL5 484 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 RAVER2Q9HCJ3 691 aaKnown RBP13.86□□□□□ -0.19
CAST-223ENST00000508608 UBN1Q9NPG3 1134 aa13.86□□□□□ -0.19
CAST-223ENST00000508608 ATP9AO75110 1047 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 DGAT1O75907 488 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 ALADP13716 330 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 PSMD6Q15008 389 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 ZKSCAN8Q15776 578 aaPredicted RBP13.85□□□□□ -0.19
CAST-223ENST00000508608 ARHGEF16Q5VV41 709 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 ADAM22Q9P0K1 906 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 TBK1Q9UHD2 729 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 FAM47DPA6NHR8 397 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 RASA4BC9J798 803 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 RASA4O43374 803 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 GH1P01241 217 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 CCND2P30279 289 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 CHRNA5P30532 468 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 ZACNQ401N2 412 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 TBC1D31Q96DN5 1066 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 RBM41Q96IZ5 413 aaKnown RBP13.85□□□□□ -0.19
CAST-223ENST00000508608 RBM15Q96T37 977 aaKnown RBP eCLIP13.85□□□□□ -0.198e-7■■■□□ 15.1
CAST-223ENST00000508608 GMLQ99445 158 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 MLXIPLQ9NP71 852 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 SIP14410 1827 aa13.85□□□□□ -0.19
CAST-223ENST00000508608 LOC102724159A0A0B4J2E5 919 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
CAST-223ENST00000508608 PLSCR1O15162 318 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 MAFGO15525 162 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 ZBED4O75132 1171 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 HLA-DRAP01903 254 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 TNNI1P19237 187 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 KLRC2P26717 231 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 MAGEA4P43358 317 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 LIG4P49917 911 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 NOMO3P69849 1222 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 MAP3K10Q02779 954 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 MPP2Q14168 576 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 FBF1Q8TES7 1133 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 RSRC1Q96IZ7 334 aaKnown RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 C11orf70Q9BRQ4 267 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 EURLQ9NYK6 297 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 SENP1Q9P0U3 644 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 GABBR1Q9UBS5 961 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 NFASCO94856 1347 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 CALCAP01258 141 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 FDX1P10109 184 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 GNA15P30679 374 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 ALDH5A1P51649 535 aaPredicted RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 KCNJ2P63252 427 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
CAST-223ENST00000508608 TMED2Q15363 201 aa13.84□□□□□ -0.19
CAST-223ENST00000508608 P3H1Q32P28 736 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms