RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 SV2CQ496J9 727 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 EPC2Q52LR7 807 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 PPM1KQ8N3J5 372 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 SPC24Q8NBT2 197 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 MMS19Q96T76 1030 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 PI4K2AQ9BTU6 479 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 COLEC11Q9BWP8 271 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 CXXC1Q9P0U4 656 aaPredicted RBP11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 FAN1Q9Y2M0 1017 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 PRG3Q9Y2Y8 225 aaPredicted RBP11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 INSL6Q9Y581 213 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 TTC3P53804 2025 aa11.86□□□□□ -0.51
BRCC3P1-201ENST00000508559 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 CARNS1A5YM72 827 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 TADA2AO75478 443 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 B3GAT3O94766 335 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 GJB5O95377 273 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 CDC25BP30305 580 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 LRPAP1P30533 357 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 KLK7P49862 253 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 MFAP3P55082 362 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 YWHAEP62258 255 aaKnown RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SOX4Q06945 474 aaPredicted RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 TRIM14Q14142 442 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SHHQ15465 462 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 WDR72Q3MJ13 1102 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 DCLRE1AQ6PJP8 1040 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 DSTYKQ6XUX3 929 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 ZNF280BQ86YH2 543 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 FIBCD1Q8N539 461 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 GSTCDQ8NEC7 633 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 CPLX3Q8WVH0 158 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 RABGGTAQ92696 567 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SEMA4DQ92854 862 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 IQCDQ96DY2 449 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 FAM81BQ96LP2 452 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 RAD9AQ99638 391 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 DNAI2Q9GZS0 605 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 UBE2TQ9NPD8 197 aaPredicted RBP11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 RALGAPA2Q2PPJ7 1873 aa11.85□□□□□ -0.51
BRCC3P1-201ENST00000508559 LTBP2Q14767 1821 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 TRAPPC3O43617 180 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 HUS1O60921 280 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 DDHD2O94830 711 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 LAG3P18627 525 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 PAX3P23760 479 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 USP8P40818 1118 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 CLCNKBP51801 687 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 MLLT1Q03111 559 aaPredicted RBP11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 C9orf50Q5SZB4 431 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 KLHDC7AQ5VTJ3 777 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 SPOPLQ6IQ16 392 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 TMEM130Q8N3G9 435 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 ZNF558Q96NG5 402 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 TMEM175Q9BSA9 504 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 NRDE2Q9H7Z3 1164 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 PLCB1Q9NQ66 1216 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 CACNG4Q9UBN1 327 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 SIK3Q9Y2K2 1263 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
BRCC3P1-201ENST00000508559 ANO9A1A5B4 782 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 PIRO00625 290 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 NRP1O14786 923 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 PPEF2O14830 753 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 ASS1P00966 412 aaKnown RBP11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 RFX1P22670 979 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 RGS19P49795 217 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 BCAR1P56945 870 aa11.83□□□□□ -0.52
BRCC3P1-201ENST00000508559 DSC1Q08554 894 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms