RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 SSX2IPQ9Y2D8 614 aa11.42□□□□□ -0.58
SKI-204ENST00000508416 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
SKI-204ENST00000508416 IRAK3Q9Y616 596 aa11.42□□□□□ -0.58
SKI-204ENST00000508416 VWA8A3KMH1 1905 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 ANO9A1A5B4 782 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 PPEF2O14830 753 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 NCK2O43639 380 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 MBD3O95983 291 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 TNNC2P02585 160 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 TMEM191BP0C7N4 346 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
SKI-204ENST00000508416 TNNI1P19237 187 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 FGFR3P22607 806 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 CCNE1P24864 410 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
SKI-204ENST00000508416 DSG1Q02413 1049 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 ADAM15Q13444 863 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 DUSP6Q16828 381 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 DUOXA2Q1HG44 320 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 LMBRD2Q68DH5 695 aaPredicted RBP11.41□□□□□ -0.58
SKI-204ENST00000508416 KLHL10Q6JEL2 608 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
SKI-204ENST00000508416 EP400NLQ6ZTU2 488 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 WDR49Q8IV35 697 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 CSGALNACT2Q8N6G5 542 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 ANKRD36BP1Q96IX9 119 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 FAM84AQ96KN4 292 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 EMILIN2Q9BXX0 1053 aa11.41□□□□□ -0.58
SKI-204ENST00000508416 PTPRJQ12913 1337 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 PRUNE2Q8WUY3 3088 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 EYSQ5T1H1 3165 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 SPTBN5Q9NRC6 3674 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 CETN3O15182 167 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 MAPK13O15264 365 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 CLASP2O75122 1294 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 AKAP3O75969 853 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 ITGB3P05106 788 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 KRT19P08727 400 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 CNPP09543 421 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 PAX3P23760 479 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 KLRC2P26717 231 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 TKTP29401 623 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 POLR2BP30876 1174 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 PSMC2P35998 433 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 LILRA4P59901 499 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 RBP5P82980 135 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 LRRC63Q05C16 580 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 RTP2Q5QGT7 225 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 SCARA3Q6AZY7 606 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 PRSS55Q6UWB4 352 aaPredicted RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 DSTYKQ6XUX3 929 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 GPR65Q8IYL9 337 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 EFHBQ8N7U6 833 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 C1orf127Q8N9H9 656 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 PARD3BQ8TEW8 1205 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 ZNF516Q92618 1163 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 HLA-CQ95604 372 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 PABPC5Q96DU9 382 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 SUSD3Q96L08 255 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 KLHL5Q96PQ7 755 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 CDCA3Q99618 268 aaPredicted RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 MTMR12Q9C0I1 747 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 RXFP1Q9HBX9 757 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 AGAP1Q9UPQ3 857 aa11.4□□□□□ -0.58
SKI-204ENST00000508416 R3HCC1Q9Y3T6 440 aaKnown RBP11.4□□□□□ -0.58
SKI-204ENST00000508416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.39□□□□□ -0.59
SKI-204ENST00000508416 BICDL2A1A5D9 508 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 SYN3O14994 580 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 SPTLC1O15269 473 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 TEX28O15482 410 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 LINC01565O15544 149 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 KRT13P13646 458 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
SKI-204ENST00000508416 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.593e-6■■■■■ 27.1
SKI-204ENST00000508416 TAF6P49848 677 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 DLG4P78352 724 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 PSMD5Q16401 504 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 CTC1Q2NKJ3 1217 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 PDXDC1Q6P996 788 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 MLKLQ8NB16 471 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 APPL2Q8NEU8 664 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 PLEKHO2Q8TD55 490 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 GZF1Q9H116 711 aaPredicted RBP11.39□□□□□ -0.59
SKI-204ENST00000508416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.39□□□□□ -0.59
SKI-204ENST00000508416 ITGA11Q9UKX5 1188 aa11.39□□□□□ -0.59
SKI-204ENST00000508416 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms