RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PTPRJQ12913 1337 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 GTPBP10A4D1E9 387 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 GOLGA6L19H0YKK7 550 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 PIRO00625 290 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 NRP1O14786 923 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 B4GALT3O60512 393 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 B3GAT3O94766 335 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 KIF4AO95239 1232 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 AFPP02771 609 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 ITGB3P05106 788 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 TRIM49P0CI25 452 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 TRIM49CP0CI26 452 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 MYOGP15173 224 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 ZNF18P17022 549 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 PIK3CAP42336 1068 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 MTIF2P46199 727 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 AARSP49588 968 aaKnown RBP eCLIP11.05□□□□□ -0.64
HTT-204ENST00000508321 MYL7Q01449 175 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 CREMQ03060 361 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 TRPC3Q13507 836 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 BMS1Q14692 1282 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 NCAPHQ15003 741 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 IQCB1Q15051 598 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 EPC2Q52LR7 807 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 TCP11X2Q5H9J9 407 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 OR5B17Q8NGF7 314 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 SPATA18Q8TC71 538 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 HERC2P3Q9BVR0 1158 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 FAM124BQ9H5Z6 455 aaPredicted RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 VRTNQ9H8Y1 702 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 GOLGA2P5Q9HBQ8 144 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 PUF60Q9UHX1 559 aaKnown RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
HTT-204ENST00000508321 NUB1Q9Y5A7 615 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 VWA8A3KMH1 1905 aa11.05□□□□□ -0.64
HTT-204ENST00000508321 ATG2AQ2TAZ0 1938 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 H3BNC9 293 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 RBAK-RBAKDNI3L0D1 243 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 SYN3O14994 580 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 PHACTR2O75167 634 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 FGF18O76093 207 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
HTT-204ENST00000508321 KRT19P08727 400 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 P4HA1P13674 534 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 FMO5P49326 533 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 DLG4P78352 724 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 PPP3CAQ08209 521 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 NCOA4Q13772 614 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 TDRD10Q5VZ19 366 aaKnown RBP11.04□□□□□ -0.64
HTT-204ENST00000508321 LMBRD2Q68DH5 695 aaPredicted RBP11.04□□□□□ -0.64
HTT-204ENST00000508321 SMYD5Q6GMV2 418 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.04□□□□□ -0.64
HTT-204ENST00000508321 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 KLHL23Q8NBE8 558 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 FBXL13Q8NEE6 735 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 SUSD3Q96L08 255 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 TUBGCP2Q9BSJ2 902 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 C17orf80Q9BSJ5 609 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 ZNF576Q9H609 170 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 CBX8Q9HC52 389 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
HTT-204ENST00000508321 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 DSEQ9UL01 958 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 COQ4Q9Y3A0 265 aa11.04□□□□□ -0.64
HTT-204ENST00000508321 FSD2A1L4K1 749 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 M0QZQ0 153 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 TADA2AO75478 443 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 ARHGEF15O94989 841 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 EFEMP2O95967 443 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 SOD2P04179 222 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 ODC1P11926 461 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 TYMPP19971 482 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 GCLMP48507 274 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 LILRA4P59901 499 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 PTPROQ16827 1216 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 ZNF699Q32M78 642 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 TTC39CQ8N584 583 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 TOP6BLQ8N6T0 577 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 APPL2Q8NEU8 664 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 FAM81BQ96LP2 452 aa11.03□□□□□ -0.64
HTT-204ENST00000508321 POP1Q99575 1024 aaKnown RBP11.03□□□□□ -0.64
HTT-204ENST00000508321 OXCT2Q9BYC2 517 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms