RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-216ENST00000507944 MYH15Q9Y2K3 1946 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 LACTBL1A8MY62 500 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 OGTO15294 1046 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 LRG1P02750 347 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 CYP3A5P20815 502 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 RFX1P22670 979 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 LRPAP1P30533 357 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 PTPAQ15257 358 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 SPECC1Q5M775 1068 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 ZBTB41Q5SVQ8 909 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 TPGS2Q68CL5 300 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 USP49Q70CQ1 688 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 TCEAL8Q8IYN2 117 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 TMEM130Q8N3G9 435 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 FIZ1Q96SL8 496 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 RPF1Q9H9Y2 349 aaKnown RBP22.67■■□□□ 1.22
CLDND1-216ENST00000507944 CYP4F11Q9HBI6 524 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 PCDHB8Q9UN66 801 aa22.67■■□□□ 1.22
CLDND1-216ENST00000507944 MRPS23Q9Y3D9 190 aaKnown RBP22.67■■□□□ 1.22
CLDND1-216ENST00000507944 FAM189A1O60320 539 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 SEC24AO95486 1093 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 RHOP08100 348 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 PTPN2P17706 415 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 NMT1P30419 496 aaKnown RBP22.66■■□□□ 1.22
CLDND1-216ENST00000507944 ABCD1P33897 745 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 GPC5P78333 572 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 GTF2BQ00403 316 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 ENOX2Q16206 610 aaKnown RBP22.66■■□□□ 1.22
CLDND1-216ENST00000507944 ZNF280DQ6N043 979 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 NPAS3Q8IXF0 933 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 CCDC105Q8IYK2 499 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 DTWD2Q8NBA8 298 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 ING5Q8WYH8 240 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 TSPAN18Q96SJ8 248 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 TBC1D17Q9HA65 648 aa22.66■■□□□ 1.22
CLDND1-216ENST00000507944 A0A0B4J269 797 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 M0QZQ0 153 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 XPOTO43592 962 aaKnown RBP22.65■■□□□ 1.22
CLDND1-216ENST00000507944 ADRB2P07550 413 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 SYT1P21579 422 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 RESTQ13127 1097 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 SLC39A4Q6P5W5 647 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 KRI1Q8N9T8 703 aaKnown RBP22.65■■□□□ 1.22
CLDND1-216ENST00000507944 MSTO1Q9BUK6 570 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 AVENQ9NQS1 362 aaPredicted RBP22.65■■□□□ 1.22
CLDND1-216ENST00000507944 ARHGEF3Q9NR81 526 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 CCDC39Q9UFE4 941 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 SRPRBQ9Y5M8 271 aaKnown RBP22.65■■□□□ 1.22
CLDND1-216ENST00000507944 FAM186AA6NE01 2351 aa22.65■■□□□ 1.22
CLDND1-216ENST00000507944 GFRA3O60609 400 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 GUCY2FP51841 1108 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 SLC5A9Q2M3M2 681 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 ZC2HC1CQ53FD0 456 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-216ENST00000507944 PHLDB3Q6NSJ2 640 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 FAM173BQ6P4H8 233 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 MAP4K3Q8IVH8 894 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 FAM212AQ96EL1 285 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 MCRS1Q96EZ8 462 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 AFF4Q9UHB7 1163 aaKnown RBP22.64■■□□□ 1.21
CLDND1-216ENST00000507944 FBXO2Q9UK22 296 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-216ENST00000507944 INSL5Q9Y5Q6 135 aa22.64■■□□□ 1.21
CLDND1-216ENST00000507944 PROB1E7EW31 1015 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 OAZ2O95190 189 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CEBPZQ03701 1054 aaKnown RBP22.63■■□□□ 1.21
CLDND1-216ENST00000507944 YWHAHQ04917 246 aaPredicted RBP22.63■■□□□ 1.21
CLDND1-216ENST00000507944 ADCY1Q08828 1119 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CD302Q8IX05 232 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 INTS4Q96HW7 963 aaKnown RBP22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CLIC6Q96NY7 704 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 KXD1Q9BQD3 176 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CORO1BQ9BR76 489 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 GDE1Q9NZC3 331 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 STK17AQ9UEE5 414 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CPSF3Q9UKF6 684 aaKnown RBP22.63■■□□□ 1.21
CLDND1-216ENST00000507944 MAFFQ9ULX9 164 aa22.63■■□□□ 1.21
CLDND1-216ENST00000507944 TIMM13Q9Y5L4 95 aaPredicted RBP22.63■■□□□ 1.21
CLDND1-216ENST00000507944 CACNA1IQ9P0X4 2223 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 ANKRD63C9JTQ0 380 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 CPB1P15086 417 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 NBL1P41271 181 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 AARSP49588 968 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLDND1-216ENST00000507944 SPATA1Q5VX52 437 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 RRAGBQ5VZM2 374 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 JADE1Q6IE81 842 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 DSTYKQ6XUX3 929 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 DYMQ7RTS9 669 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 ST6GALNAC4Q9H4F1 302 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 SIT1Q9Y3P8 196 aa22.62■■□□□ 1.21
CLDND1-216ENST00000507944 ANGPT1Q15389 498 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 ADALQ6DHV7 355 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 SLFN12LQ6IEE8 588 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 RNF19BQ6ZMZ0 732 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 ZNF720Q7Z2F6 126 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 USP37Q86T82 979 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 ELMOD1Q8N336 334 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 BEST2Q8NFU1 509 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 SHDQ96IW2 340 aa22.61■■□□□ 1.21
CLDND1-216ENST00000507944 OXCT2Q9BYC2 517 aaPredicted RBP22.61■■□□□ 1.21
CLDND1-216ENST00000507944 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms