RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NXF1Q9UBU9 619 aaKnown RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 HEXIM1O94992 359 aaKnown RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 CYP1A2P05177 515 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 ZNF865P0CJ78 1059 aaPredicted RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 GNA15P30679 374 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 CDH8P55286 799 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 RHOT2Q8IXI1 618 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 STIM2Q9P246 746 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 O00370 1275 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 ERLIN1O75477 346 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TMEM191BP0C7N4 346 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 SCP2P22307 547 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 PHKA2P46019 1235 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TUBB4BP68371 445 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 GUCY2DQ02846 1103 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 DGKDQ16760 1214 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 RUFY4Q6ZNE9 571 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIN54-206ENST00000506560 MCOLN2Q8IZK6 566 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 UBR7Q8N806 425 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 ACTRT1Q8TDG2 376 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 PBKQ96KB5 322 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.321e-7■■■■□ 24.9
LIN54-206ENST00000506560 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 CELF4Q9BZC1 486 aaKnown RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 GTF3C4Q9UKN8 822 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 THAP12O43422 761 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TSPAN1O60635 241 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 HOXD8P13378 290 aaPredicted RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 EXOC8Q8IYI6 725 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 UBXN6Q9BZV1 441 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 ARHGAP39Q9C0H5 1083 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 CISHQ9NSE2 258 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 PRMT7Q9NVM4 692 aaPredicted RBP13.04□□□□□ -0.32
LIN54-206ENST00000506560 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 HES2Q9Y543 173 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
LIN54-206ENST00000506560 KRIT1O00522 736 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 MAGEB2O15479 319 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ASAP2O43150 1006 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 ASPAP45381 313 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 IQSEC1Q6DN90 963 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 C17orf99Q6UX52 265 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 TLK2Q86UE8 772 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CASKIN2Q8WXE0 1202 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 SDCBP2Q9H190 292 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 RNF14Q9UBS8 474 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 SMIM10L2AP0DMW4 78 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 SMIM10L2BP0DMW5 78 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 NOMO3P69849 1222 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 TRPC3Q13507 836 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 HDXQ7Z353 690 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 ZNF606Q8WXB4 792 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 IFT81Q8WYA0 676 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 OSMRQ99650 979 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ANAPC7Q9UJX3 599 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 NFU1Q9UMS0 254 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 B4GALT4O60513 344 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ITGB3P05106 788 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ZNF132P52740 706 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 HADHBP55084 474 aaKnown RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 CAP1Q01518 475 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CRHR2Q13324 411 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms