RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FAM160A2Q8N612 972 aaPredicted RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 BEST2Q8NFU1 509 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 GOLGA5Q8TBA6 731 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 CACTINQ8WUQ7 758 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 SCFD1Q8WVM8 642 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ATXN2LQ8WWM7 1075 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 PABPC5Q96DU9 382 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 ZMAT2Q96NC0 199 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 FAM213AQ9BRX8 229 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 EMILIN2Q9BXX0 1053 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 GTPBP4Q9BZE4 634 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 ZBP1Q9H171 429 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 CXCL16Q9H2A7 254 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 ASB7Q9H672 318 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 MARCH5Q9NX47 278 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 THEGQ9P2T0 379 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 UBQLN1Q9UMX0 589 aaKnown RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 DERAQ9Y315 318 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 IRAK3Q9Y616 596 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 FNDC1Q4ZHG4 1894 aaPredicted RBP7.89□□□□□ -1.15
GYPB-206ENST00000506516 TRANK1O15050 2925 aa7.89□□□□□ -1.15
GYPB-206ENST00000506516 EYSQ5T1H1 3165 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 RALGAPA2Q2PPJ7 1873 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 SF3B1O75533 1304 aaKnown RBP eCLIP7.88□□□□□ -1.152e-6■■■■■ 43.1
GYPB-206ENST00000506516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 C2orf71A6NGG8 1288 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 ZNF233A6NK53 670 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 HIDE1A8MVS5 230 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 TISP43B9A030 160 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 TMEM189-UBE2V1I3L0A0 370 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PODXLO00592 558 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PER2O15055 1255 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 CALUO43852 315 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 EXTL3O43909 919 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 FAM189A1O60320 539 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 RHOBTB3O94955 611 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 IL18RAPO95256 599 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 URODP06132 367 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PAX3P23760 479 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 ABL2P42684 1182 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GLUD2P49448 558 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 MRPS5P82675 430 aaKnown RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 CREMQ03060 361 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 HYAL1Q12794 435 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 ADAM15Q13444 863 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 TMEM132DQ14C87 1099 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 SURF1Q15526 300 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 DUSP6Q16828 381 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 ZBTB41Q5SVQ8 909 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 FUT10Q6P4F1 479 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PDXDC1Q6P996 788 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 CRELD2Q6UXH1 353 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 CEP57Q86XR8 500 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 NT5DC4Q86YG4 428 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
GYPB-206ENST00000506516 GPR65Q8IYL9 337 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GPD1LQ8N335 351 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 EFHBQ8N7U6 833 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GLIS3Q8NEA6 775 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 NOC3LQ8WTT2 800 aaKnown RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 ZNF516Q92618 1163 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 RABGGTAQ92696 567 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 SMARCE1Q969G3 411 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 C18orf25Q96B23 403 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 GBP4Q96PP9 640 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GSDMAQ96QA5 445 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PAAF1Q9BRP4 392 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 CBWD1Q9BRT8 395 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 HERC2P3Q9BVR0 1158 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 FGFBP2Q9BYJ0 223 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 IKZF4Q9H2S9 585 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 PRDM9Q9NQV7 894 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■■□□□ 13.8
GYPB-206ENST00000506516 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 CLDND1Q9NY35 253 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 HSPBP1Q9NZL4 362 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 DPP7Q9UHL4 492 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 R3HCC1Q9Y3T6 440 aaKnown RBP7.88□□□□□ -1.15
GYPB-206ENST00000506516 C2CD2Q9Y426 696 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 NUB1Q9Y5A7 615 aa7.88□□□□□ -1.15
GYPB-206ENST00000506516 XIRP2A4UGR9 3374 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 GOLGA8IPA6NC78 632 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 GOLGA8JA6NMD2 632 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 PDXKO00764 312 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 C2CD2LO14523 706 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 CLIC2O15247 247 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 TGFB1I1O43294 461 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
GYPB-206ENST00000506516 KIF4AO95239 1232 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 EFEMP2O95967 443 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 KLRC2P26717 231 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 LRPAP1P30533 357 aa7.87□□□□□ -1.15
GYPB-206ENST00000506516 HOXD13P35453 343 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms