RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 ASB16Q96NS5 453 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 LRRC3BQ96PB8 259 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 TRIM6Q9C030 488 aaPredicted RBP9.89□□□□□ -0.83
COPS4-204ENST00000506443 FZD8Q9H461 694 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
COPS4-204ENST00000506443 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 MTRRQ9UBK8 725 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 WASF3Q9UPY6 502 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 LOC400499M0QZD8 3231 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
COPS4-204ENST00000506443 NUP210Q8TEM1 1887 aaPredicted RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 DGAT1O75907 488 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 FGFR3P22607 806 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 CXCL12P48061 93 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 CCR3P51677 355 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 TFDP1Q14186 410 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 STPG1Q5TH74 334 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 NAIF1Q69YI7 327 aaPredicted RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 NCAPH2Q6IBW4 605 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 RUFY3Q7L099 469 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 RTL10Q7L3V2 364 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 HACE1Q8IYU2 909 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 DNASE1L2Q92874 299 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 ELSPBP1Q96BH3 223 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 EIF2AK1Q9BQI3 630 aaKnown RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 FAM126AQ9BYI3 521 aaPredicted RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 PDZD7Q9H5P4 517 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 AVENQ9NQS1 362 aaPredicted RBP9.88□□□□□ -0.83
COPS4-204ENST00000506443 GDE1Q9NZC3 331 aa9.88□□□□□ -0.83
COPS4-204ENST00000506443 SMG1Q96Q15 3661 aaKnown RBP9.87□□□□□ -0.83
COPS4-204ENST00000506443 NUP205Q92621 2012 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 WNT7AO00755 349 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 NCAM2O15394 837 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 LRP3O75074 770 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 THP07101 528 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 XRCC6P12956 609 aaKnown RBP eCLIP9.87□□□□□ -0.83
COPS4-204ENST00000506443 PSMA5P28066 241 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 RARRES1P49788 294 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 ARPP19P56211 112 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 RING1Q06587 406 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 PTGDRQ13258 359 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 TEAD2Q15562 447 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.87□□□□□ -0.83
COPS4-204ENST00000506443 CEP68Q76N32 757 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 MAEAQ7L5Y9 396 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 SLFN12Q8IYM2 578 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 CEP120Q8N960 986 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 PRIMPOLQ96LW4 560 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 KIFC3Q9BVG8 833 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 TRMT61BQ9BVS5 477 aaKnown RBP9.87□□□□□ -0.83
COPS4-204ENST00000506443 POLR3FQ9H1D9 316 aaPredicted RBP9.87□□□□□ -0.83
COPS4-204ENST00000506443 POLD4Q9HCU8 107 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 CEP72Q9P209 647 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 MRPS17Q9Y2R5 130 aaKnown RBP9.87□□□□□ -0.83
COPS4-204ENST00000506443 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
COPS4-204ENST00000506443 TSC2P49815 1807 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 DMXL2Q8TDJ6 3036 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ASCC3Q8N3C0 2202 aaKnown RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ARHGEF37A1IGU5 675 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ANTXRLA6NF34 631 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 SRRM3A6NNA2 597 aaPredicted RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 TMEM189-UBE2V1I3L0A0 370 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 DCLK1O15075 740 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ABLIM3O94929 683 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 EPN2O95208 641 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 VNN2O95498 520 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 SPATA31C1P0DKV0 1188 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ANK1P16157 1881 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 LIG1P18858 919 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 NOVA1P51513 510 aaKnown RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 CLCNKBP51801 687 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 TNK2Q07912 1038 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ZNF252P-AS1Q0IIN9 211 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ELAVL2Q12926 359 aaKnown RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 PON2Q15165 354 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 CDCA2Q69YH5 1023 aaPredicted RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 PDXDC1Q6P996 788 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 PIK3AP1Q6ZUJ8 805 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 LONP2Q86WA8 852 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 SHKBP1Q8TBC3 707 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ZSCAN18Q8TBC5 510 aaPredicted RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 PIGOQ8TEQ8 1089 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 GATA6Q92908 595 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 TNFRSF25Q93038 417 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 CHFRQ96EP1 664 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 CRISPLD1Q9H336 500 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ZFP14Q9HCL3 533 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 PRMT7Q9NVM4 692 aaPredicted RBP9.86□□□□□ -0.83
COPS4-204ENST00000506443 GTSE1Q9NYZ3 720 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 PCDHA12Q9UN75 941 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 INSL5Q9Y5Q6 135 aa9.86□□□□□ -0.83
COPS4-204ENST00000506443 ABCA7Q8IZY2 2146 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms