RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ITGA4P13612 1032 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 KCNE1P15382 129 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 CYP3A5P20815 502 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 PNPLA4P41247 253 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TNNC1P63316 161 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TUBB2AQ13885 445 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TRIM71Q2Q1W2 868 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 SYT10Q6XYQ8 523 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TRIM72Q6ZMU5 477 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 C1orf127Q8N9H9 656 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 U2AF1L4Q8WU68 220 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 KAT5Q92993 513 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 SECISBP2LQ93073 1101 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 HPDLQ96IR7 371 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TUBB2BQ9BVA1 445 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 ERVK-5Q9HDB9 667 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 FAM105AQ9NUU6 356 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 AGAP1Q9UPQ3 857 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 IPPQ9Y573 584 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
POLR2J3-211ENST00000506060 BTNL10A8MVZ5 291 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CYP26A1O43174 497 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CST3P01034 146 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 PNMA6AP0CW24 399 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 GHRP10912 638 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CKBP12277 381 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 GZMAP12544 262 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CDR2Q01850 454 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 XKR4Q5GH76 650 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 UBXN11Q5T124 520 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 SPOPLQ6IQ16 392 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 GLYCTKQ8IVS8 523 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 WNT8BQ93098 351 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 PADI3Q9ULW8 664 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
POLR2J3-211ENST00000506060 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 ZNF263O14978 683 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 ZNF623O75123 536 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 RTN2O75298 545 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 SGPL1O95470 568 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 CYP11B1P15538 503 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 SELPP16109 830 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 CD52P31358 61 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 CDK7P50613 346 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 LPIN1Q14693 890 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 TMEM270Q6UE05 265 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 RPUSD2Q8IZ73 545 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 RBBP8NLQ8NC74 664 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 SYT11Q9BT88 431 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 FTHL17Q9BXU8 183 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 NOCTQ9UK39 431 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
POLR2J3-211ENST00000506060 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 SMIM28A0A1B0GU29 152 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 ANKRD62A6NC57 917 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 DCDC2CA8MYV0 355 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 MED7O43513 233 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 PAX3P23760 479 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 AKAP5P24588 427 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 GNA15P30679 374 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 MTFR1Q15390 333 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 ZBTB6Q15916 424 aa12.86□□□□□ -0.35
POLR2J3-211ENST00000506060 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms