RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DIP2BQ9P265 1576 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 LEFTY2O00292 366 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 RECQL4O94761 1208 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 APOBEC3AP31941 199 aaPredicted RBP7.22□□□□□ -1.25
NIPBL-205ENST00000505998 CHN2P52757 468 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 HK3P52790 923 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 SLC4A10Q6U841 1118 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 B3GNT9Q6UX72 402 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 RNF207Q6ZRF8 634 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 SH3RF3Q8TEJ3 882 aaPredicted RBP7.22□□□□□ -1.25
NIPBL-205ENST00000505998 TAAR9Q96RI9 348 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 DCLRE1CQ96SD1 692 aaKnown RBP7.22□□□□□ -1.25
NIPBL-205ENST00000505998 GSTO2Q9H4Y5 243 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 LMBRD1Q9NUN5 540 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 FBXO34Q9NWN3 711 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 PARPBPQ9NWS1 579 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 MAP3K4Q9Y6R4 1608 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
NIPBL-205ENST00000505998 EHBP1L1Q8N3D4 1523 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 ARAP3Q8WWN8 1544 aa7.22□□□□□ -1.25
NIPBL-205ENST00000505998 C1QTNF3-AMACRE9PGA6 284 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 PLSCR1O15162 318 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 TRIM24O15164 1050 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 SCAF4O95104 1147 aaKnown RBP7.21□□□□□ -1.26
NIPBL-205ENST00000505998 ITGB1P05556 798 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 BUD31P41223 144 aaPredicted RBP7.21□□□□□ -1.26
NIPBL-205ENST00000505998 RABL3Q5HYI8 236 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 HEATR3Q7Z4Q2 680 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 DENND1CQ8IV53 801 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 IL17RDQ8NFM7 739 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 CPT1CQ8TCG5 803 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 CDK5RAP3Q96JB5 506 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 CGRRF1Q99675 332 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 PACSIN1Q9BY11 444 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 REXO4Q9GZR2 422 aaKnown RBP7.21□□□□□ -1.26
NIPBL-205ENST00000505998 ABCF2Q9UG63 623 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 FEZ2Q9UHY8 353 aaPredicted RBP7.21□□□□□ -1.26
NIPBL-205ENST00000505998 NR2E3Q9Y5X4 410 aa7.21□□□□□ -1.26
NIPBL-205ENST00000505998 PPRC1Q5VV67 1664 aaKnown RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 WDR7Q9Y4E6 1490 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 H3BML4 177 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ERC2O15083 957 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 CTNND1O60716 968 aaKnown RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 HAUS5O94927 633 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ALDH2P05091 517 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 SBK3P0C264 359 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ATF3P18847 181 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 IL12RB1P42701 662 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 RNASE9P60153 205 aaKnown RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 TOB2Q14106 344 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ARHGAP29Q52LW3 1261 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 C14orf80Q86SX3 495 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 FITM2Q8N6M3 262 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 FAM167AQ96KS9 214 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ACO2Q99798 780 aaKnown RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 ZNF703Q9H7S9 590 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 GNL3LQ9NVN8 582 aaKnown RBP7.2□□□□□ -1.26
NIPBL-205ENST00000505998 STXBP5LQ9Y2K9 1186 aa7.2□□□□□ -1.26
NIPBL-205ENST00000505998 CDC42BPAQ5VT25 1732 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 NT5C1B-RDH14C9J2C7 533 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 H3BUI4 141 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 F2RL2O00254 374 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 FAM20BO75063 409 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 FTH1P19P0C7X4 201 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 SLC6A2P23975 617 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 GFOD2Q3B7J2 385 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 FLYWCH1Q4VC44 716 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 SPRED1Q7Z699 444 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 SH2D3CQ8N5H7 860 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 ZBTB34Q8NCN2 500 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 TTC8Q8TAM2 541 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 RUNDC1Q96C34 613 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 PLEKHG4BQ96PX9 1271 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 WDCPQ9H6R7 721 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 PNPOQ9NVS9 261 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 SIDT1Q9NXL6 827 aaKnown RBP7.19□□□□□ -1.26
NIPBL-205ENST00000505998 TRPM5Q9NZQ8 1165 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 CEP72Q9P209 647 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 KIF14Q15058 1648 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 PREX2Q70Z35 1606 aa7.19□□□□□ -1.26
NIPBL-205ENST00000505998 SUPT6HQ7KZ85 1726 aaKnown RBP7.18□□□□□ -1.26
NIPBL-205ENST00000505998 MYO5CQ9NQX4 1742 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 ABCC10Q5T3U5 1492 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 CDHR4A6H8M9 788 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 UBXN7O94888 489 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 SPATA31D3P0C874 917 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 MYBP10242 640 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 TYRP14679 529 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 FAM102AQ5T9C2 384 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-205ENST00000505998 TSHZ3Q63HK5 1081 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 SPATA31D4Q6ZUB0 917 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 GDF7Q7Z4P5 450 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 AOPEPQ8N6M6 819 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 PPP1R35Q8TAP8 253 aa7.18□□□□□ -1.26
NIPBL-205ENST00000505998 KLHDC4Q8TBB5 520 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms