RNA–Protein interactions for RNA: ENST00000505616.5

TMCC1-205, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 2

Gene TMCC1, Length 402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-205ENST00000505616 CHST7Q9NS84 486 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 INTS13Q9NVM9 706 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 CLDND1Q9NY35 253 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 STK39Q9UEW8 545 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 AGAP1Q9UPQ3 857 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
TMCC1-205ENST00000505616 ATG2AQ2TAZ0 1938 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 PIRO00625 290 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 CETN3O15182 167 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 LINC01565O15544 149 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 AKAP3O75969 853 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 MBD3O95983 291 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 ITGB3P05106 788 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 RPL17P18621 184 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 CCNE1P24864 410 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 KLRC2P26717 231 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 POLR2BP30876 1174 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 LILRA4P59901 499 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 DLG4P78352 724 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 RBM10P98175 930 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 DSG1Q02413 1049 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 ELAVL2Q12926 359 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 MYBPC2Q14324 1141 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 ZCWPW2Q504Y3 356 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 FAM186BQ8IYM0 893 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 RNF168Q8IYW5 571 aaPredicted RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 C1orf127Q8N9H9 656 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 PLEKHO2Q8TD55 490 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 KLHL5Q96PQ7 755 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 SSX2IPQ9Y2D8 614 aa11.31□□□□□ -0.6
TMCC1-205ENST00000505616 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 TIMM13Q9Y5L4 95 aaPredicted RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
TMCC1-205ENST00000505616 ANO9A1A5B4 782 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 SPTLC1O15269 473 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 LILRB3O75022 631 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 PHACTR2O75167 634 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 SPATA31D3P0C874 917 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 FGFR3P22607 806 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
TMCC1-205ENST00000505616 PPP1R2P41236 205 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 RBP5P82980 135 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 FKBP3Q00688 224 aaKnown RBP11.3□□□□□ -0.6
TMCC1-205ENST00000505616 NFIL3Q16649 462 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 DUSP6Q16828 381 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
TMCC1-205ENST00000505616 SPATA31D4Q6ZUB0 917 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 LNX1Q8TBB1 728 aaPredicted RBP11.3□□□□□ -0.6
TMCC1-205ENST00000505616 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 HLA-CQ95604 372 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
TMCC1-205ENST00000505616 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 IRAK3Q9Y616 596 aa11.3□□□□□ -0.6
TMCC1-205ENST00000505616 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
TMCC1-205ENST00000505616 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
TMCC1-205ENST00000505616 TEX28O15482 410 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 NCK2O43639 380 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 CLSTN1O94985 981 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
TMCC1-205ENST00000505616 KRT13P13646 458 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 KCNA5P22460 613 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 NDUFV1P49821 464 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 TAF6P49848 677 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 VAMP7P51809 220 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 ARPP19P56211 112 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 TFF2Q03403 129 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 BFSP1Q12934 665 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 PAK1Q13153 545 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 ADAM15Q13444 863 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 BIRC3Q13489 604 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 CLUL1Q15846 466 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 PSMD5Q16401 504 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
TMCC1-205ENST00000505616 EFHBQ8N7U6 833 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 APPL2Q8NEU8 664 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 VN1R2Q8NFZ6 395 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 PARD3BQ8TEW8 1205 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 SUSD3Q96L08 255 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 REV3LO60673 3130 aa11.29□□□□□ -0.6
TMCC1-205ENST00000505616 COL6A3P12111 3177 aa11.28□□□□□ -0.6
TMCC1-205ENST00000505616 EYSQ5T1H1 3165 aa11.28□□□□□ -0.6
TMCC1-205ENST00000505616 BICDL2A1A5D9 508 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms