RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZNF480Q8WV37 535 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 TFAP2CQ92754 450 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 HOXB13Q92826 284 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 KCNG1Q9UIX4 513 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 EID1Q9Y6B2 187 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 RPTORQ8N122 1335 aa6.43□□□□□ -1.38
DEPDC1B-203ENST00000505017 MYOM1P52179 1685 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 FAM135BQ49AJ0 1406 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 MED14O60244 1454 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CPS1P31327 1500 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CCDC78A2IDD5 438 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 DRGXA6NNA5 263 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CXorf49A8MYA2 514 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 PPFIA4O75335 1185 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 NUDT3O95989 172 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 ELANEP08246 267 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CRHR1P34998 444 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CHN2P52757 468 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CCT2P78371 535 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 TP53BP2Q13625 1128 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 EFCAB12Q6NXP0 572 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 KCNK18Q7Z418 384 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 PLXDC1Q8IUK5 500 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 LMBR1Q8WVP7 490 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 ASB10Q8WXI3 467 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 RIN2Q8WYP3 895 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 BBC3Q96PG8 261 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 ORAI2Q96SN7 254 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 IFT22Q9H7X7 185 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 USP15Q9Y4E8 981 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 EVC2Q86UK5 1308 aa6.42□□□□□ -1.38
DEPDC1B-203ENST00000505017 SPDEFO95238 335 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 RBP3P10745 1247 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 ALOX15P16050 662 aaPredicted RBP6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 FBLP22087 321 aaKnown RBP6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 ADSLP30566 484 aaPredicted RBP6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 FLT3LGP49771 235 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 CDK17Q00537 523 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 PPP3CAQ08209 521 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 STRN3Q13033 797 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 FAM47AQ5JRC9 791 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 AGAP9Q5VTM2 703 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 TGFBRAP1Q8WUH2 860 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 USP7Q93009 1102 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 POLR3GLQ9BT43 218 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 POGKQ9P215 609 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 CLCA2Q9UQC9 943 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 PIK3R4Q99570 1358 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 ADAMTS13Q76LX8 1427 aa6.41□□□□□ -1.38
DEPDC1B-203ENST00000505017 PIPSLA2A3N6 862 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 DIRC3C9JPN6 131 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 KIAA0355O15063 1070 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 ZEB2O60315 1214 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 SESN3P58005 492 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 ADRM1Q16186 407 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 VOPP1Q96AW1 172 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
DEPDC1B-203ENST00000505017 PARD3Q8TEW0 1356 aa6.4□□□□□ -1.39
DEPDC1B-203ENST00000505017 TULP4Q9NRJ4 1543 aa6.4□□□□□ -1.39
DEPDC1B-203ENST00000505017 USP32Q8NFA0 1604 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 PPFIA2O75334 1257 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 CFIP05156 583 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 SEC24CP53992 1094 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 TAP1Q03518 808 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 TTC1Q99614 292 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 R3HDMLQ9H3Y0 253 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 RIOX1Q9H6W3 641 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 PANK3Q9H999 370 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 CYP4F11Q9HBI6 524 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 ZNHIT2Q9UHR6 403 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 KNSTRNQ9Y448 316 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 MYBBP1AQ9BQG0 1328 aaKnown RBP6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 SALL3Q9BXA9 1300 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 BRD4O60885 1362 aaPredicted RBP6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 PTCH1Q13635 1447 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 ADGRB2O60241 1585 aa6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
DEPDC1B-203ENST00000505017 ZAR1LA6NP61 321 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 PJA2O43164 708 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 AKR1B10O60218 316 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 PRSS23O95084 383 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 EGR2P11161 476 aaPredicted RBP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 DDX6P26196 483 aaKnown RBP eCLIP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 SREBF1P36956 1147 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 PLA2G5P39877 138 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 IL12RB1P42701 662 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 MRPS9P82933 396 aaKnown RBP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 RESTQ13127 1097 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 MUM1Q2TAK8 710 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 B3GNTL1Q67FW5 361 aaPredicted RBP6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 GPR156Q8NFN8 814 aa6.38□□□□□ -1.39
DEPDC1B-203ENST00000505017 OR7D4Q8NG98 312 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms