RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KIF3AQ9Y496 699 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 DOCK8Q8NF50 2099 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 PDCD11Q14690 1871 aaKnown RBP14.38□□□□□ -0.11
DDX41-204ENST00000504807 NOTCH4Q99466 2003 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 VPS37CA5D8V6 355 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 PODXLO00592 558 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 CCL16O15467 120 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 TBC1D4O60343 1298 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 CXCL8P10145 99 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 OR1D2P34982 312 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 LPAL2Q16609 132 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 GRASPQ7Z6J2 395 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 HDAC7Q8WUI4 952 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 CCDC94Q9BW85 323 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 PLEKHA4Q9H4M7 779 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 C17orf75Q9HAS0 396 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 UPF2Q9HAU5 1272 aaKnown RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 ZDHHC7Q9NXF8 308 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
DDX41-204ENST00000504807 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 CDY1Q9Y6F8 540 aa14.37□□□□□ -0.11
DDX41-204ENST00000504807 PPEF2O14830 753 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 TOM1L1O75674 476 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 C8AP07357 584 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 PMLP29590 882 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 ZNF131P52739 623 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 MCL1Q07820 350 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 RAB33AQ14088 237 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 ZBTB44Q8NCP5 570 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 ITFG1Q8TB96 612 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 SLC7A14Q8TBB6 771 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 RAD54LQ92698 747 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 CLIC6Q96NY7 704 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 ACAP3Q96P50 834 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 BACH2Q9BYV9 841 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 ZSCAN32Q9NX65 697 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 EPS15L1Q9UBC2 864 aa14.36□□□□□ -0.11
DDX41-204ENST00000504807 RBM19Q9Y4C8 960 aaKnown RBP14.36□□□□□ -0.11
DDX41-204ENST00000504807 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
DDX41-204ENST00000504807 A0A087X0B3 334 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 C1RP00736 705 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 PROS1P07225 676 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 SYT1P21579 422 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
DDX41-204ENST00000504807 NMT1P30419 496 aaKnown RBP14.35□□□□□ -0.11
DDX41-204ENST00000504807 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX41-204ENST00000504807 ZC2HC1CQ53FD0 456 aaPredicted RBP14.35□□□□□ -0.11
DDX41-204ENST00000504807 TSSK4Q6SA08 328 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 HAUS6Q7Z4H7 955 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
DDX41-204ENST00000504807 ZMIZ1Q9ULJ6 1067 aa14.35□□□□□ -0.11
DDX41-204ENST00000504807 GCN1Q92616 2671 aaKnown RBP14.35□□□□□ -0.11
DDX41-204ENST00000504807 MYH11P35749 1972 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 CNOT1A5YKK6 2376 aaKnown RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 IGF2RP11717 2491 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 WDR27A2RRH5 827 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 SOBPA7XYQ1 873 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 LILRB5O75023 590 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 SEC24AO95486 1093 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 VNN2O95498 520 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 LAMP2P13473 410 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 YARSP54577 528 aaKnown RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 ROR1Q01973 937 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 CREMQ03060 361 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 HTR4Q13639 388 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 MRPL58Q14197 206 aaKnown RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 ZBTB6Q15916 424 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 ENOX2Q16206 610 aaKnown RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 SLC5A9Q2M3M2 681 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 AXDND1Q5T1B0 1012 aaPredicted RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 N4BP2L1Q5TBK1 243 aaPredicted RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 ZPBP2Q6X784 338 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 FGF14Q92915 247 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 KCNN1Q92952 543 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 AK8Q96MA6 479 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 UROC1Q96N76 676 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 FGFBP2Q9BYJ0 223 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 TBX20Q9UMR3 447 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 MTF2Q9Y483 593 aaPredicted RBP14.34□□□□□ -0.11
DDX41-204ENST00000504807 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
DDX41-204ENST00000504807 LACTBL1A8MY62 500 aa14.33□□□□□ -0.12
DDX41-204ENST00000504807 K7ENM7 598 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms