RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 PTPRZ1P23471 2315 aaPredicted RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PLXNA3P51805 1871 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PLXNA4Q9HCM2 1894 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 SMIM28A0A1B0GU29 152 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 CASTOR2A6NHX0 329 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 NT5C1B-RDH14C9J2C7 533 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 NRP1O14786 923 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 XPOTO43592 962 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 FAM189A1O60320 539 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 ALDH2P05091 517 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 GALTP07902 379 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 FBXO45P0C2W1 286 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 ALADP13716 330 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 KCNE1P15382 129 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 ADSSP30520 456 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 SLC11A1P49279 550 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 ACOT2P49753 483 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 POU5F1Q01860 360 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 BMS1Q14692 1282 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 KNOP1Q1ED39 458 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 SLC10A6Q3KNW5 377 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 XKR4Q5GH76 650 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 TCEAL5Q5H9L2 206 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 ALKAL1Q6UXT8 129 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 GPD1LQ8N335 351 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 NOC3LQ8WTT2 800 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 POF1BQ8WVV4 589 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PPP2R3CQ969Q6 453 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 SAAL1Q96ER3 474 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 IGSF21Q96ID5 467 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 UROC1Q96N76 676 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PPP1R10Q96QC0 940 aaKnown RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 TSPAN18Q96SJ8 248 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 CBWD1Q9BRT8 395 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 FAM213AQ9BRX8 229 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 COLEC11Q9BWP8 271 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 KCNH6Q9H252 994 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 IKZF4Q9H2S9 585 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 MIOSQ9NXC5 875 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 LZTS1Q9Y250 596 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PRG3Q9Y2Y8 225 aaPredicted RBP7.87□□□□□ -1.15
RUFY3-207ENST00000504805 PCDHA5Q9Y5H7 936 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 VPS13AQ96RL7 3174 aa7.87□□□□□ -1.15
RUFY3-207ENST00000504805 CITO14578 2027 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PDCD11Q14690 1871 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 TTC26A0AVF1 554 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PDXKO00764 312 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 GRM6O15303 877 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 TGFB1I1O43294 461 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 CALUO43852 315 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 EXTL3O43909 919 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 B4GALT3O60512 393 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 CSPG5O95196 566 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 IL18RAPO95256 599 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 CA8P35219 290 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 HOXD13P35453 343 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 LTBRP36941 435 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 STIM1Q13586 685 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PROX2Q3B8N5 592 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PUS10Q3MIT2 529 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ZBTB41Q5SVQ8 909 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 SWT1Q5T5J6 900 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ZNF658Q5TYW1 1059 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PDE12Q6L8Q7 609 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 TMEM173Q86WV6 379 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ADHFE1Q8IWW8 467 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 C12orf56Q8IXR9 622 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 GUF1Q8N442 669 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PRSS33Q8NF86 280 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 SPATA20Q8TB22 786 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 SPPL3Q8TCT6 385 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 MICAL1Q8TDZ2 1067 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ERCC4Q92889 916 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ZMAT2Q96NC0 199 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 CXCL16Q9H2A7 254 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PCIF1Q9H4Z3 704 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ASB7Q9H672 318 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 KIAA1586Q9HCI6 787 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ENTPD7Q9NQZ7 604 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 LMBRD1Q9NUN5 540 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 RBAKQ9NYW8 714 aaPredicted RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 HSPBP1Q9NZL4 362 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 PRKAG3Q9UGI9 489 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 ADAM28Q9UKQ2 775 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 UBQLN1Q9UMX0 589 aaKnown RBP7.86□□□□□ -1.15
RUFY3-207ENST00000504805 MAPK8IP1Q9UQF2 711 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 DERAQ9Y315 318 aa7.86□□□□□ -1.15
RUFY3-207ENST00000504805 SF3B1O75533 1304 aaKnown RBP eCLIP7.85□□□□□ -1.154e-7■■■■■ 86.2
RUFY3-207ENST00000504805 GOLGA8IPA6NC78 632 aa7.85□□□□□ -1.15
RUFY3-207ENST00000504805 ZNF233A6NK53 670 aa7.85□□□□□ -1.15
RUFY3-207ENST00000504805 GOLGA8JA6NMD2 632 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms