RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TLE2Q04725 743 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 BIRC3Q13489 604 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 CUL2Q13617 745 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 TMEM132DQ14C87 1099 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 ASIC2Q16515 512 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 LRRC26Q2I0M4 334 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 GLRA4Q5JXX5 417 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 SFMBT2Q5VUG0 894 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 ZNF571Q7Z3V5 609 aaPredicted RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 NT5DC4Q86YG4 428 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 CD302Q8IX05 232 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 LNX1Q8TBB1 728 aaPredicted RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 LPPQ93052 612 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 MCOLN1Q9GZU1 580 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 SDCBP2Q9H190 292 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 NUCKS1Q9H1E3 243 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 MIOSQ9NXC5 875 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 NOCTQ9UK39 431 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 A0A0U1RQF3 1178 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 SMIM28A0A1B0GU29 152 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 C9IYK1 514 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 FANCGO15287 622 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 GFPT2O94808 682 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 NDUFA10O95299 355 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ABL1P00519 1130 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 ITGB3P05106 788 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 TMEM191BP0C7N4 346 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 CHRNB2P17787 502 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 POLR2BP30876 1174 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 CLCN1P35523 988 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 EIF4A3P38919 411 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 STAT1P42224 750 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ARHGAP25P42331 645 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 PTK2Q05397 1052 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 CETN1Q12798 172 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ARHGAP44Q17R89 818 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 PLEKHG4Q58EX7 1191 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 APBB1IPQ7Z5R6 666 aaPredicted RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 PALB2Q86YC2 1186 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 DDX1Q92499 740 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ANKRD36BP1Q96IX9 119 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 BCO2Q9BYV7 579 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 DPP3Q9NY33 737 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 POLIQ9UNA4 740 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 PPP2R2CQ9Y2T4 447 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 NME7Q9Y5B8 376 aa11.18□□□□□ -0.62
TPM3-217ENST00000504663 EPN1Q9Y6I3 576 aaPredicted RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 FNDC1Q4ZHG4 1894 aaPredicted RBP11.18□□□□□ -0.62
TPM3-217ENST00000504663 DDX3XO00571 662 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM3-217ENST00000504663 PIRO00625 290 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 B4GALT3O60512 393 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 CALCAP01258 141 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 TNNC2P02585 160 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 FERP16591 822 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 CYP3A5P20815 502 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 ITGB8P26012 769 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 MLH1P40692 756 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 KIF11P52732 1056 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 FAM189BP81408 668 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 NCBP1Q09161 790 aaKnown RBP11.17□□□□□ -0.62
TPM3-217ENST00000504663 BFSP2Q13515 415 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 C9orf57Q5W0N0 161 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 LIMS2Q7Z4I7 341 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 CCDC170Q8IYT3 715 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 WHAMMQ8TF30 809 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 SLC20A1Q8WUM9 679 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 PAWRQ96IZ0 340 aaKnown RBP11.17□□□□□ -0.62
TPM3-217ENST00000504663 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 ADAM2Q99965 735 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
TPM3-217ENST00000504663 TRIM6Q9C030 488 aaPredicted RBP11.17□□□□□ -0.62
TPM3-217ENST00000504663 NIF3L1Q9GZT8 377 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms