RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 TUBA3CQ13748 450 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 MINDY4Q4G0A6 757 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 CCDC93Q567U6 631 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 TUBA3EQ6PEY2 450 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 CRIP3Q6Q6R5 217 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 ZNF365Q70YC5 407 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 OVCH2Q7RTZ1 564 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 PPP1R3BQ86XI6 285 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 COL23A1Q86Y22 540 aaPredicted RBP6.52□□□□□ -1.37
COPS4-203ENST00000504274 WDR75Q8IWA0 830 aaKnown RBP6.52□□□□□ -1.37
COPS4-203ENST00000504274 Q8N1X5 172 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 CELF5Q8N6W0 485 aaKnown RBP6.52□□□□□ -1.37
COPS4-203ENST00000504274 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 TLR10Q9BXR5 811 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 MRPL46Q9H2W6 279 aaKnown RBP6.52□□□□□ -1.37
COPS4-203ENST00000504274 ARMT1Q9H993 441 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 DDX20Q9UHI6 824 aaKnown RBP6.52□□□□□ -1.37
COPS4-203ENST00000504274 ATP11BQ9Y2G3 1177 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 STXBP5LQ9Y2K9 1186 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 PCDHA1Q9Y5I3 950 aa6.52□□□□□ -1.37
COPS4-203ENST00000504274 A0A1B0GTW7 788 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 A6NNZ2 444 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 H3BUI4 141 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 B3GALT2O43825 422 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 CTNND1O60716 968 aaKnown RBP6.51□□□□□ -1.37
COPS4-203ENST00000504274 ARIH2O95376 493 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 AHSGP02765 367 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 FGFR4P22455 802 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 HTR1BP28222 390 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 OCA2Q04671 838 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 CCDC157Q569K6 752 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 TMIEQ8NEW7 156 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 TTC8Q8TAM2 541 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 KLHL32Q96NJ5 620 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 NRDE2Q9H7Z3 1164 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 SLAMF7Q9NQ25 335 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 CHPF2Q9P2E5 772 aa6.51□□□□□ -1.37
COPS4-203ENST00000504274 VSTM5A8MXK1 200 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 RNASET2O00584 256 aaKnown RBP6.5□□□□□ -1.37
COPS4-203ENST00000504274 NARSO43776 548 aaKnown RBP6.5□□□□□ -1.37
COPS4-203ENST00000504274 LPXNO60711 386 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 TUSC2O75896 110 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 NDUFA10O95299 355 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 HSD11B2P80365 405 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 B3GNTL1Q67FW5 361 aaPredicted RBP6.5□□□□□ -1.37
COPS4-203ENST00000504274 MAPKAPK5Q8IW41 473 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 NUP133Q8WUM0 1156 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 SLC35A4Q96G79 324 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 CDK5RAP3Q96JB5 506 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 NT5C1BQ96P26 610 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 ADAM2Q99965 735 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 WDCPQ9H6R7 721 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 SIDT1Q9NXL6 827 aaKnown RBP6.5□□□□□ -1.37
COPS4-203ENST00000504274 DKK2Q9UBU2 259 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 FEZ2Q9UHY8 353 aaPredicted RBP6.5□□□□□ -1.37
COPS4-203ENST00000504274 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
COPS4-203ENST00000504274 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 E9PLN8 166 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 MATN4O95460 622 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 PEX11BO96011 259 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 CFIP05156 583 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 GJB1P08034 283 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 FTH1P19P0C7X4 201 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 SPATA31D3P0C874 917 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 U2AF1L5P0DN76 240 aaPredicted RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 PIK3CGP48736 1102 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 PSMC1P62191 440 aaKnown RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 U2AF1Q01081 240 aaKnown RBP eCLIP6.49□□□□□ -1.37
COPS4-203ENST00000504274 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 SPATA31D4Q6ZUB0 917 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 RHOUQ7L0Q8 258 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 MRGPREQ86SM8 312 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 SLC17A8Q8NDX2 589 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 VKORC1Q9BQB6 163 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 IMPG2Q9BZV3 1241 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 REXO4Q9GZR2 422 aaKnown RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 RNPEPQ9H4A4 650 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 MMRN2Q9H8L6 949 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 BRD9Q9H8M2 597 aa6.49□□□□□ -1.37
COPS4-203ENST00000504274 MRPS18AQ9NVS2 196 aaKnown RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 REXO2Q9Y3B8 237 aaKnown RBP6.49□□□□□ -1.37
COPS4-203ENST00000504274 CENPVL1A0A0U1RR11 272 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 GAGE12BA1L429 117 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 GAGE12HA6NDE8 117 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 ZFPL1O95159 310 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 ATF3P18847 181 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 TACR2P21452 398 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 RAB1AP62820 205 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 RESTQ13127 1097 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 GRM3Q14832 879 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 LLGL1Q15334 1064 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 NPNTQ6UXI9 565 aa6.48□□□□□ -1.37
COPS4-203ENST00000504274 TMEM132CQ8N3T6 1108 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms