RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	BRWD3	Q6RI45	1802 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	ARFGEF1	Q9Y6D6	1849 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157		A0A1W2PRG0	241 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	TGFB1I1	O43294	461 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	LDHC	P07864	332 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	SERPINB3	P29508	390 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	MAN1A1	P33908	653 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	SPIRE1	Q08AE8	756 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	NR1H3	Q13133	447 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	STAT4	Q14765	748 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	OTOA	Q7RTW8	1153 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	ZNF554	Q86TJ5	538 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	VPS52	Q8N1B4	723 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	ERMN	Q8TAM6	284 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	SNF8	Q96H20	258 aa		18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.9	■□□□□ 0.62
POLR2J3-209	ENST00000504157	TCRBV7S2A1N4T	A0A589	114 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RPA1	P27694	616 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RPS8	P62241	208 aa	Known RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	THOC5	Q13769	683 aa	Known RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PTK6	Q13882	451 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GRM2	Q14416	872 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SLC15A2	Q16348	729 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	P3H1	Q32P28	736 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CATSPER3	Q86XQ3	398 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MAPKAPK5	Q8IW41	473 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CCDC77	Q9BR77	488 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DNAJC18	Q9H819	358 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RMI1	Q9H9A7	625 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	JMJD4	Q9H9V9	463 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TUBGCP4	Q9UGJ1	667 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SAP30BP	Q9UHR5	308 aa	Known RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GRID1	Q9ULK0	1009 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SH3GLB1	Q9Y371	365 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TAF1	P21675	1872 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	hCG_2014768	A0A024R1R8	64 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PPP1R11	O60927	126 aa	Predicted RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	VIL1	P09327	827 aa	Known RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ANPEP	P15144	967 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GAP43	P17677	238 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	IVD	P26440	423 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KCNJ1	P48048	391 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RAP1GDS1	P52306	607 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PHEX	P78562	749 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PPP2R5C	Q13362	524 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RASA3	Q14644	834 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RNF207	Q6ZRF8	634 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PTF1A	Q7RTS3	328 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TRABD2A	Q86V40	505 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KCTD17	Q8N5Z5	321 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	HAUS1	Q96CS2	278 aa		18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PAIP2B	Q9ULR5	123 aa	Known RBP	18.89	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZMYM2	Q9UBW7	1377 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RBM47	A0AV96	593 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FSCN2	O14926	492 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SORBS3	O60504	671 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZNF189	O75820	626 aa	Predicted RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	HAUS5	O94927	633 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FTL	P02792	175 aa	Predicted RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CHRNB2	P17787	502 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GRIA2	P42262	883 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PLOD1	Q02809	727 aa	Predicted RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KRT17	Q04695	432 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PLEKHG4	Q58EX7	1191 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	FYB2	Q5VWT5	728 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DUS1L	Q6P1R4	473 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SCYL3	Q8IZE3	742 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PDCD7	Q8N8D1	485 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DGCR14	Q96DF8	476 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TAS2R1	Q9NYW7	299 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TBX3	O15119	743 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CLIC2	O15247	247 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	GCNT3	O95395	438 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	HNRNPC	P07910	306 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SPATA31C1	P0DKV0	1188 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	CDC16	Q13042	620 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	OLFML2B	Q68BL8	750 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MAML3	Q96JK9	1138 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SMC6	Q96SB8	1091 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SEPT11	Q9NVA2	429 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	KANSL3	Q9P2N6	904 aa		18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SMG5	Q9UPR3	1016 aa	Known RBP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
POLR2J3-209	ENST00000504157	UBE4B	O95155	1302 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	SPAG7	O75391	227 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ABHD2	P08910	425 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	AMPD1	P23109	780 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	STAT3	P40763	770 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ARHGAP24	Q8N264	748 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	POP1	Q99575	1024 aa	Known RBP	18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	PSTPIP2	Q9H939	334 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	ZDHHC7	Q9NXF8	308 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	MTMR4	Q9NYA4	1195 aa		18.87	■□□□□ 0.61
POLR2J3-209	ENST00000504157	DNAJC6	O75061	913 aa		18.86	■□□□□ 0.61
POLR2J3-209	ENST00000504157	TBCA	O75347	108 aa	Known RBP	18.86	■□□□□ 0.61

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