RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 U2AF1L5P0DN76 240 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 FDXRP22570 491 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 CTSSP25774 331 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADSLP30566 484 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 MCAMP43121 646 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 SIM1P81133 766 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 U2AF1Q01081 240 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 OCA2Q04671 838 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 NOMO1Q15155 1222 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 UBE3CQ15386 1083 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 GPR162Q16538 588 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 FAM214AQ32MH5 1076 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 RRP12Q5JTH9 1297 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 IFIT1BQ5T764 474 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 CCDC181Q5TID7 509 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 CXorf57Q6NSI4 855 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ABHD15Q6UXT9 468 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 CATIPQ7Z7H3 387 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 PIK3C3Q8NEB9 887 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 GPR156Q8NFN8 814 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 OR5M3Q8NGP4 307 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 TTC8Q8TAM2 541 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF384Q8TF68 577 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 NRG4Q8WWG1 115 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ASB10Q8WXI3 467 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 RIN2Q8WYP3 895 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 DPF2Q92785 391 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 COA7Q96BR5 231 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 PAWRQ96IZ0 340 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 CCDC136Q96JN2 1154 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 C8orf48Q96LL4 319 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 ADGRE3Q9BY15 652 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 RBM12Q9NTZ6 932 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLC17A6Q9P2U8 582 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 SAP30BPQ9UHR5 308 aaKnown RBP3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 SCOCQ9UIL1 159 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 LIMCH1Q9UPQ0 1083 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 FPGT-TNNI3KV9GXZ4 949 aa3.16□□□□□ -1.9
HMGB1P35-201ENST00000503360 GOLGA6CA6NDK9 693 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 GOLGA6BA6NDN3 693 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCDC154A6NI56 674 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 B5MCH6 92 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 HTRA2O43464 458 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 AP1G1O43747 822 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 EIF5BO60841 1220 aaKnown RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 FOSP01100 380 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 CFIP05156 583 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 POU2F2P09086 479 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 LTA4HP09960 611 aaKnown RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 GOLGA6DP0CG33 693 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 HSPA6P17066 643 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 PDCP20941 246 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 LPOP22079 712 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 AKAP5P24588 427 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 PTTG1IPP53801 180 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 NHLH2Q02577 135 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 PPP3CAQ08209 521 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 SCAPQ12770 1279 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 TP53BP2Q13625 1128 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 GTF2H3Q13889 308 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 MINDY4Q4G0A6 757 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 SP5Q6BEB4 398 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 FAM180AQ6UWF9 173 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 CRELD2Q6UXH1 353 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 EPM2AIP1Q7L775 607 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 TAS1R1Q7RTX1 841 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 MSL3Q8N5Y2 521 aaKnown RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 SNX33Q8WV41 574 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 PDLIM2Q96JY6 352 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF778Q96MU6 729 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 AIFM3Q96NN9 605 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 C7orf25Q9BPX7 421 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 GTPBP4Q9BZE4 634 aaKnown RBP3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 EPC1Q9H2F5 836 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 ANLNQ9NQW6 1124 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 ING3Q9NXR8 418 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 GOLGA6AQ9NYA3 693 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 RPTORQ8N122 1335 aa3.15□□□□□ -1.91
HMGB1P35-201ENST00000503360 VSTM5A8MXK1 200 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 KIF3BO15066 747 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 PHF2O75151 1096 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 OFD1O75665 1012 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 EDNRBP24530 442 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 ECHS1P30084 290 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 WASP42768 502 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 FXR1P51114 621 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 RNASE9P60153 205 aaKnown RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 MEF2AQ02078 507 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 IL10RAQ13651 578 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 ZNF267Q14586 743 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 SEPT2Q15019 361 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 GFOD2Q3B7J2 385 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 C3orf36Q3SXR2 165 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 PDCD4Q53EL6 469 aaKnown RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 C19orf54Q5BKX5 351 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 FAM102AQ5T9C2 384 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 USP45Q70EL2 814 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 SYT12Q8IV01 421 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 RHOT1Q8IXI2 618 aa3.14□□□□□ -1.91
HMGB1P35-201ENST00000503360 GRAMD1CQ8IYS0 662 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms