RNA–Protein interactions for RNA: ENST00000502985.5

NR1I3-217, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-217ENST00000502985 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 ZNF516Q92618 1163 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
NR1I3-217ENST00000502985 GUCD1Q96NT3 240 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-217ENST00000502985 GPR62Q9BZJ7 368 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 ENTPD7Q9NQZ7 604 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 ARMCX3Q9UH62 379 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-217ENST00000502985 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 AGAP1Q9UPQ3 857 aa11.24□□□□□ -0.61
NR1I3-217ENST00000502985 SF3B1O75533 1304 aaKnown RBP eCLIP11.24□□□□□ -0.61
NR1I3-217ENST00000502985 CARNS1A5YM72 827 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TMEM189-UBE2V1I3L0A0 370 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 C2CD2LO14523 706 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 PHACTR2O75167 634 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 FGFR1OPO95684 399 aaKnown RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 RPL9P32969 192 aaKnown RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 GCLMP48507 274 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 ERVFC1P60507 584 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 PLCB3Q01970 1234 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 ADGRE1Q14246 886 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 DCLRE1AQ6PJP8 1040 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 FOXR2Q6PJQ5 311 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TAS1R1Q7RTX1 841 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TRAPPC11Q7Z392 1133 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 FILIP1Q7Z7B0 1213 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 USP37Q86T82 979 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 CEP57Q86XR8 500 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 ELMO3Q96BJ8 720 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 BORCS6Q96GS4 357 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TCF25Q9BQ70 676 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 HERC2P3Q9BVR0 1158 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 PUF60Q9UHX1 559 aaKnown RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 SIX4Q9UIU6 781 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-217ENST00000502985 TRANK1O15050 2925 aa11.23□□□□□ -0.61
NR1I3-217ENST00000502985 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-217ENST00000502985 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 PIRO00625 290 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 SPTLC1O15269 473 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 URODP06132 367 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
NR1I3-217ENST00000502985 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 TAF6P49848 677 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 UBE3AQ05086 875 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 CAMK1Q14012 370 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 TIGD5Q53EQ6 642 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 FAM171A1Q5VUB5 890 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 DSTYKQ6XUX3 929 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 AOPEPQ8N6M6 819 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 CXorf38Q8TB03 319 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 MICAL1Q8TDZ2 1067 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
NR1I3-217ENST00000502985 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
NR1I3-217ENST00000502985 MTMR10Q9NXD2 777 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
NR1I3-217ENST00000502985 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
NR1I3-217ENST00000502985 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.61
NR1I3-217ENST00000502985 VNN1O95497 513 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 GNA14O95837 355 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 C4BPAP04003 597 aaKnown RBP11.21□□□□□ -0.61
NR1I3-217ENST00000502985 SOD2P04179 222 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 FOSL2P15408 326 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
NR1I3-217ENST00000502985 GLUD2P49448 558 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 MXI1P50539 228 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 LILRA4P59901 499 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 MYL6P60660 151 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 CLDN10P78369 228 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 RBP5P82980 135 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 MYL5Q02045 173 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 TRPC3Q13507 836 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 NCOA4Q13772 614 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 PTPROQ16827 1216 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 ZACNQ401N2 412 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 SV2CQ496J9 727 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 CBWD6Q4V339 395 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-217ENST00000502985 CBWD3Q5JTY5 395 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 RTP2Q5QGT7 225 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 CBWD5Q5RIA9 395 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 PRSS55Q6UWB4 352 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-217ENST00000502985 SV2AQ7L0J3 742 aa11.21□□□□□ -0.61
NR1I3-217ENST00000502985 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms