RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ACAD10Q6JQN1 1059 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 CATSPER4Q7RTX7 472 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 NT5DC4Q86YG4 428 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 C7orf31Q8N865 590 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 DNAJB3Q8WWF6 145 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 MTG1Q9BT17 334 aaPredicted RBP23.56■■□□□ 1.36
PTPN13-205ENST00000502971 SPC25Q9HBM1 224 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 MROH7Q68CQ1 1323 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 H2AFXP16104 143 aaPredicted RBP23.56■■□□□ 1.36
PTPN13-205ENST00000502971 ZNF699Q32M78 642 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 SLC10A6Q3KNW5 377 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 JADE1Q6IE81 842 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 TMEM270Q6UE05 265 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 RBBP8NLQ8NC74 664 aaPredicted RBP23.56■■□□□ 1.36
PTPN13-205ENST00000502971 XYLT2Q9H1B5 865 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 OSGEPQ9NPF4 335 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 GINS2Q9Y248 185 aa23.56■■□□□ 1.36
PTPN13-205ENST00000502971 MEFVO15553 781 aaPredicted RBP23.55■■□□□ 1.36
PTPN13-205ENST00000502971 SEPT4O43236 478 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 KIF4AO95239 1232 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 NFICP08651 508 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 FGFR4P22455 802 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 EIF4BP23588 611 aaKnown RBP23.55■■□□□ 1.36
PTPN13-205ENST00000502971 AXLP30530 894 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 HOXA11P31270 313 aaPredicted RBP23.55■■□□□ 1.36
PTPN13-205ENST00000502971 PAFAH1B1P43034 410 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 CCDC181Q5TID7 509 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 SCARA3Q6AZY7 606 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 TRIM72Q6ZMU5 477 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 PEX26Q7Z412 305 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 DAAM2Q86T65 1068 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 PPP1R13LQ8WUF5 828 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 OSMRQ99650 979 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 CCDC94Q9BW85 323 aaPredicted RBP23.55■■□□□ 1.36
PTPN13-205ENST00000502971 CDHR5Q9HBB8 845 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 ARGLU1Q9NWB6 273 aaPredicted RBP23.55■■□□□ 1.36
PTPN13-205ENST00000502971 STXBP5LQ9Y2K9 1186 aa23.55■■□□□ 1.36
PTPN13-205ENST00000502971 MYADML2A6NDP7 307 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 PDE2AO00408 941 aaPredicted RBP23.54■■□□□ 1.36
PTPN13-205ENST00000502971 MTA2O94776 668 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 ZNF132P52740 706 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 YWHAEP62258 255 aaKnown RBP23.54■■□□□ 1.36
PTPN13-205ENST00000502971 GNASQ5JWF2 1037 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 NOTUMQ6P988 496 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 SLC27A1Q6PCB7 646 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 FBXO38Q6PIJ6 1188 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 ABCB6Q9NP58 842 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 C2CD2Q9Y426 696 aa23.54■■□□□ 1.36
PTPN13-205ENST00000502971 RARBP10826 455 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 UNGP13051 313 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 ZSCAN20P17040 1043 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 GNA15P30679 374 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 ATICP31939 592 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CXCR5P32302 372 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CAP1Q01518 475 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CFAP221Q4G0U5 840 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 C1orf127Q8N9H9 656 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 MSANTD4Q8NCY6 345 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 UBE2Q2Q8WVN8 375 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PSMB7Q99436 277 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PLEKHA5Q9HAU0 1116 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CTTNBP2NLQ9P2B4 639 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 GTF3C4Q9UKN8 822 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 BUB1BO60566 1050 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 NPTXRO95502 500 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CYP1A1P04798 512 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CYP1A2P05177 515 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 CRYBB1P53674 252 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 ZNF200P98182 395 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 TMEM132DQ14C87 1099 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PPP1R2P3Q6NXS1 205 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 TAF2Q6P1X5 1199 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 NT5DC3Q86UY8 548 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 NOA1Q8NC60 698 aaKnown RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PXYLP1Q8TE99 480 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PBKQ96KB5 322 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 SIX4Q9UIU6 781 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 AMFRQ9UKV5 643 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 PACSIN2Q9UNF0 486 aaPredicted RBP23.53■■□□□ 1.36
PTPN13-205ENST00000502971 COG5Q9UP83 839 aa23.53■■□□□ 1.36
PTPN13-205ENST00000502971 TUBBP07437 444 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 KRT19P08727 400 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 SNX17Q15036 470 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 TRIM11Q96F44 468 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 PARD6BQ9BYG5 372 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 VRTNQ9H8Y1 702 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 CISHQ9NSE2 258 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 UVRAGQ9P2Y5 699 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 DERAQ9Y315 318 aa23.52■■□□□ 1.36
PTPN13-205ENST00000502971 MYBL1P10243 752 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 ASPAP45381 313 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 CACNB2Q08289 660 aaPredicted RBP23.51■■□□□ 1.35
PTPN13-205ENST00000502971 ZNF667Q5HYK9 610 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 C11orf63Q6NUN7 778 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 CXorf38Q8TB03 319 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 EPC1Q9H2F5 836 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 ANKZF1Q9H8Y5 726 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 ITGA11Q9UKX5 1188 aa23.51■■□□□ 1.35
PTPN13-205ENST00000502971 CALCAP01258 141 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms