RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
NR1I3-216ENST00000502848 DNAI2Q9GZS0 605 aa9.74□□□□□ -0.85
NR1I3-216ENST00000502848 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
NR1I3-216ENST00000502848 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-216ENST00000502848 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
NR1I3-216ENST00000502848 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-216ENST00000502848 IPPQ9Y573 584 aa9.74□□□□□ -0.85
NR1I3-216ENST00000502848 PAXBP1Q9Y5B6 917 aa9.74□□□□□ -0.85
NR1I3-216ENST00000502848 A0A0U1RQF3 1178 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 ANO9A1A5B4 782 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 RECQL4O94761 1208 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SGPL1O95470 568 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 EOMESO95936 686 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 NFICP08651 508 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 PAEPP09466 180 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 HSPA8P11142 646 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SELPP16109 830 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 FGFR4P22455 802 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 LRPAP1P30533 357 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF132P52740 706 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 APBA1Q02410 837 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 LPIN1Q14693 890 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 KIAA1328Q86T90 577 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 TMEM192Q8IY95 271 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SPATA18Q8TC71 538 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 APBB2Q92870 758 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 DEFB118Q96PH6 123 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 TRMT13Q9NUP7 481 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-216ENST00000502848 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-216ENST00000502848 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 PYGBP11216 843 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 SP7Q8TDD2 431 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-216ENST00000502848 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-216ENST00000502848 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-216ENST00000502848 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-216ENST00000502848 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-216ENST00000502848 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
NR1I3-216ENST00000502848 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-216ENST00000502848 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-216ENST00000502848 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-216ENST00000502848 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-216ENST00000502848 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms