RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IQCDQ96DY2 449 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 CEP95Q96GE4 821 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 RPL10LQ96L21 214 aaKnown RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SNX22Q96L94 193 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SIGLEC10Q96LC7 697 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 STK33Q9BYT3 514 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ENKD1Q9H0I2 346 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 BRD9Q9H8M2 597 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 NTMQ9P121 344 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 NCDNQ9UBB6 729 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 ADAM29Q9UKF5 820 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
HMGB1P3-201ENST00000502802 SKAP2O75563 359 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 HSD3B1P14060 373 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 ATP5JP18859 108 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 PHKA1P46020 1223 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 ALDH9A1P49189 494 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 GZMKP49863 264 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 ADAM8P78325 824 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 SLC44A4Q53GD3 710 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 MFSD14BQ5SR56 506 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 CCDC70Q6NSX1 233 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 MICU3Q86XE3 530 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 KLHL36Q8N4N3 616 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 OR14K1Q8NGZ2 314 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 LTV1Q96GA3 475 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 MYOCQ99972 504 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 PACSIN1Q9BY11 444 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZNF518BQ9C0D4 1074 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 KCNH6Q9H252 994 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 GJB4Q9NTQ9 266 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 RLIMQ9NVW2 624 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 C9orf78Q9NZ63 289 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 CFAP97Q9P2B7 532 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 LZTS1Q9Y250 596 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
HMGB1P3-201ENST00000502802 GOLGA6L3A6NEY3 463 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 PRSS29PA6NIE9 313 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 CXorf49A8MYA2 514 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 HNRNPDLO14979 420 aaKnown RBP6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 KIAA0391O15091 583 aaKnown RBP6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 THAP12O43422 761 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC43A1O75387 559 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 MT-ND5P03915 603 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 HGFACQ04756 655 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 GRM1Q13255 1194 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 CTBP1Q13363 440 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 RAB32Q13637 225 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 TBR1Q16650 682 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 MCTP2Q6DN12 878 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 GGT6Q6P531 493 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 CNKSR3Q6P9H4 555 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 FRMD5Q7Z6J6 570 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 NLGN4YQ8NFZ3 816 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 EIF2AQ9BY44 585 aaKnown RBP6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZFP64Q9NPA5 681 aa6.33□□□□□ -1.4
HMGB1P3-201ENST00000502802 TCRBV7S2A1N4TA0A589 114 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 ARHGAP6O43182 974 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 GNAI2P04899 355 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 GJB1P08034 283 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 RARBP10826 455 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 PDIA3P30101 505 aaKnown RBP6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 NPEPPSP55786 919 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 CAP1Q01518 475 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 NFYCQ13952 458 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZACNQ401N2 412 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 LMBRD2Q68DH5 695 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 CATSPERGQ6ZRH7 1159 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 PDSS2Q86YH6 399 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 PCSK9Q8NBP7 692 aaKnown RBP6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 TXNDC5Q8NBS9 432 aaKnown RBP6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 RABGGTAQ92696 567 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 PWWP2AQ96N64 755 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 GPHA2Q96T91 129 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 NDC1Q9BTX1 674 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 JKAMPQ9P055 326 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF69Q9UC07 566 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC39A10Q9ULF5 831 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 MAN2B2Q9Y2E5 1009 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 GPR52Q9Y2T5 361 aa6.32□□□□□ -1.4
HMGB1P3-201ENST00000502802 SH3D21A4FU49 640 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 CLCA1A8K7I4 914 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 PYCARD-AS1I3L0S3 204 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 AREL1O15033 823 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 PJA2O43164 708 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 SNRPA1P09661 255 aaKnown RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 MXRA7P84157 204 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms