RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 MRPL17Q9NRX2 175 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-216ENST00000502557 NLRC5Q86WI3 1866 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 LRRIQ3A6PVS8 624 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 C2CD2LO14523 706 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 PER2O15055 1255 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 CETN3O15182 167 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 SPTLC1O15269 473 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 ITGB3P05106 788 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 TNNI1P19237 187 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 FGFR3P22607 806 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 GTF2F1P35269 517 aaKnown RBP eCLIP19.26■□□□□ 0.679e-12■■■■□ 26
CCHCR1-216ENST00000502557 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 NRIP1P48552 1158 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 FKBP3Q00688 224 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 PAK1Q13153 545 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 CCDC183Q5T5S1 534 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 KIAA1841Q6NSI8 718 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 FOXR2Q6PJQ5 311 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 RBM23Q86U06 439 aaKnown RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 FAM186BQ8IYM0 893 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 MLKLQ8NB16 471 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 TMC2Q8TDI7 906 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 RIN2Q8WYP3 895 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 ZNF516Q92618 1163 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 PPP2R3CQ969Q6 453 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 SUSD3Q96L08 255 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 TTPALQ9BTX7 342 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 TLE6Q9H808 572 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 SIX4Q9UIU6 781 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 ITGA11Q9UKX5 1188 aa19.26■□□□□ 0.67
CCHCR1-216ENST00000502557 BICDL2A1A5D9 508 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 TNNC2P02585 160 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 STX17P56962 302 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 NLRP12P59046 1061 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 LILRA4P59901 499 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 DLG4P78352 724 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 CLDN10P78369 228 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 DUSP6Q16828 381 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 PRSS55Q6UWB4 352 aaPredicted RBP19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 GPR65Q8IYL9 337 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 CSGALNACT2Q8N6G5 542 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 MKNK1Q9BUB5 465 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 IGFLR1Q9H665 355 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 TMEM63CQ9P1W3 806 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 SSX2IPQ9Y2D8 614 aa19.25■□□□□ 0.67
CCHCR1-216ENST00000502557 M0QZQ0 153 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 CLASP2O75122 1294 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 CNPP09543 421 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 RBP5P82980 135 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 COL19A1Q14993 1142 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 SKIV2LQ15477 1246 aaKnown RBP19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 DPCR1Q3MIW9 517 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 C1orf220Q5T0J3 134 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 TRAPPC11Q7Z392 1133 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 PIK3R5Q8WYR1 880 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 BORCS6Q96GS4 357 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 KLHL5Q96PQ7 755 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 RXFP1Q9HBX9 757 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 PCDHB8Q9UN66 801 aa19.24■□□□□ 0.67
CCHCR1-216ENST00000502557 PLXNA4Q9HCM2 1894 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 SYN3O14994 580 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 SLC16A3O15427 465 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 KRT19P08727 400 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 EPB41P11171 864 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 PAX3P23760 479 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 TAF6P49848 677 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 VAMP7P51809 220 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 MCCD1P59942 119 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 DSTYKQ6XUX3 929 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 INTS8Q75QN2 995 aaKnown RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 LRRC52Q8N7C0 313 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 LNX1Q8TBB1 728 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 ZNF560Q96MR9 790 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 CEP63Q96MT8 703 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 MED15Q96RN5 788 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 CDCA3Q99618 268 aaPredicted RBP19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 EMILIN2Q9BXX0 1053 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 RWDD2AQ9UIY3 292 aa19.23■□□□□ 0.67
CCHCR1-216ENST00000502557 CDH23Q9H251 3354 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 TEX28O15482 410 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 LINC01565O15544 149 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 NCK2O43639 380 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 TRIM49P0CI25 452 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 TRIM49CP0CI26 452 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 KRT13P13646 458 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 PTMSP20962 102 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 PNPLA4P41247 253 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 AP3M2P53677 418 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 ENPEPQ07075 957 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 BFSP1Q12934 665 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 ADAM15Q13444 863 aa19.22■□□□□ 0.67
CCHCR1-216ENST00000502557 PSMD5Q16401 504 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms