RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 AP5M1Q9H0R1 490 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TJP2Q9UDY2 1190 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PCDHB12Q9Y5F1 795 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PCDHA2Q9Y5H9 948 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PSMA7O14818 248 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 MCF2LO15068 1137 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SHOXO15266 292 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 PHGDHO43175 533 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 HTRA2O43464 458 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 NEMFO60524 1076 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SOCS5O75159 536 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 ADAMTS4O75173 837 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 PAHP00439 452 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 THBDP07204 575 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 FERP16591 822 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 AKT1P31749 480 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 THPOP40225 353 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 CCT4P50991 539 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 PSMC6P62333 389 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 MPP3Q13368 585 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 FSTL4Q6MZW2 842 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DCLRE1AQ6PJP8 1040 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TMTC3Q6ZXV5 915 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 IKBIPQ70UQ0 350 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 MTFMTQ96DP5 389 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 RCC1LQ96I51 464 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 CCDC140Q96MF4 163 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 UIMC1Q96RL1 719 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 EDEM3Q9BZQ6 932 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TBCCD1Q9NVR7 557 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 COG5Q9UP83 839 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 EXOC7Q9UPT5 735 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 BAZ1AQ9NRL2 1556 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 IRS2Q9Y4H2 1338 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TSPAN9O75954 239 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 CYP2A6P11509 494 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 IL11P20809 199 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 EDNRBP24530 442 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 CTSOP43234 321 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 DLG4P78352 724 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 ACTN3Q08043 901 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 GPR68Q15743 365 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 CRY1Q16526 586 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 STT3BQ8TCJ2 826 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DDX54Q8TDD1 881 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 CREB3L4Q8TEY5 395 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 GRK7Q8WTQ7 553 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TNPO1Q92973 898 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 NSUN4Q96CB9 384 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 WDR89Q96FK6 387 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 PRPF18Q99633 342 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 CORO1BQ9BR76 489 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DSCC1Q9BVC3 393 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 GRIP2Q9C0E4 1043 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TNMDQ9H2S6 317 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 POFUT1Q9H488 388 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SENP2Q9HC62 589 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 STK32BQ9NY57 414 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 PCDHA6Q9UN73 950 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TTLL8A6PVC2 850 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 FAM177BA6PVY3 158 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 H3BNC9 293 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 UBE2CO00762 179 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SIN3BO75182 1162 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 ENDOD1O94919 500 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 MLYCDO95822 493 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SNRPA1P09661 255 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 MSX1P28360 303 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 PAFAH1B1P43034 410 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 HARS2P49590 506 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 RPS16P62249 146 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 PHC1P78364 1004 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 FOXO1Q12778 655 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DUSP4Q13115 394 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 SNAPC2Q13487 334 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TMEM132BQ14DG7 1078 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 KIF4BQ2VIQ3 1234 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 FAM69AQ5T7M9 428 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 OLFML2BQ68BL8 750 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 ARHGAP27Q6ZUM4 889 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DENND5BQ6ZUT9 1274 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TSPYL5Q86VY4 417 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 HERC6Q8IVU3 1022 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DIS3L2Q8IYB7 885 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 TBC1D22AQ8WUA7 517 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 NRG4Q8WWG1 115 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 APOL6Q9BWW8 343 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 KLHL4Q9C0H6 718 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 CCDC86Q9H6F5 360 aaKnown RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 EXOC1Q9NV70 894 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 TMEM160Q9NX00 188 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 GPC6Q9Y625 555 aaPredicted RBP4.06□□□□□ -1.76
SUB1-202ENST00000502453 FAM169AQ9Y6X4 670 aa4.06□□□□□ -1.76
SUB1-202ENST00000502453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.05□□□□□ -1.76
SUB1-202ENST00000502453 SLC12A8A0AV02 714 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 RGSL1A5PLK6 1076 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 VILLO15195 856 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 GSTA4O15217 222 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 TSPAN3O60637 253 aa4.05□□□□□ -1.76
SUB1-202ENST00000502453 SMNDC1O75940 238 aaKnown RBP eCLIP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms