RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	HACE1	Q8IYU2	909 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	CRIPAK	Q8N1N5	446 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	TMEM130	Q8N3G9	435 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	SEPT8	Q92599	483 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	PPP1R10	Q96QC0	940 aa	Known RBP	13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	APOL6	Q9BWW8	343 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	GPR88	Q9GZN0	384 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	VRTN	Q9H8Y1	702 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	APOBEC3G	Q9HC16	384 aa	Known RBP	13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	C1orf112	Q9NSG2	853 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	ABHD10	Q9NUJ1	306 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	RNF19A	Q9NV58	838 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	PARP2	Q9UGN5	583 aa		13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	LUC7L2	Q9Y383	392 aa	Known RBP	13.1	□□□□□ -0.31
MATR3-231	ENST00000502394	TRIP11	Q15643	1979 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ARHGAP33	O14559	1287 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ENPP3	O14638	875 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	STAU1	O95793	577 aa	Known RBP	13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ASS1	P00966	412 aa	Known RBP	13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	TIMP1	P01033	207 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	TNNC2	P02585	160 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	PTMA	P06454	111 aa	Known RBP	13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	CYP3A5	P20815	502 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	PIK3CA	P42336	1068 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	LRMP	Q12912	555 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	BIRC3	Q13489	604 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	SMYD5	Q6GMV2	418 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	WDR59	Q6PJI9	974 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	SLC24A5	Q71RS6	500 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ZNF454	Q8N9F8	522 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	OR8K1	Q8NGG5	319 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	CPLX3	Q8WVH0	158 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	LPP	Q93052	612 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	TATDN2	Q93075	761 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	KREMEN1	Q96MU8	473 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	NT5C1B	Q96P26	610 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	PI4K2A	Q9BTU6	479 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ELAC1	Q9H777	363 aa	Known RBP	13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	KLK14	Q9P0G3	267 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	DNAJC12	Q9UKB3	198 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	ITGA11	Q9UKX5	1188 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	UBQLN1	Q9UMX0	589 aa	Known RBP	13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	PLAGL2	Q9UPG8	496 aa		13.09	□□□□□ -0.31
MATR3-231	ENST00000502394	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	ANO9	A1A5B4	782 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	LRRC53	A6NM62	1247 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	EOMES	O95936	686 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	TPM1	P09493	284 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	LRPAP1	P30533	357 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	AFF1	P51825	1210 aa	Known RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	GUCY2F	P51841	1108 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	MYL6	P60660	151 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	NOP14	P78316	857 aa	Known RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	GCNT1	Q02742	428 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	SOX4	Q06945	474 aa	Predicted RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	GLRA4	Q5JXX5	417 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	UBR7	Q8N806	425 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	TAF4B	Q92750	862 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	SYN2	Q92777	582 aa	Predicted RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	KAT5	Q92993	513 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	C18orf25	Q96B23	403 aa	Predicted RBP	13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	PGBD4	Q96DM1	585 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	FAXDC2	Q96IV6	333 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	ZFP42	Q96MM3	310 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	GAD1	Q99259	594 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	STK33	Q9BYT3	514 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	RSAD1	Q9HA92	442 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	UBN1	Q9NPG3	1134 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	NLRC4	Q9NPP4	1024 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	MIOS	Q9NXC5	875 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	DPP3	Q9NY33	737 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	TUBGCP4	Q9UGJ1	667 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	NUB1	Q9Y5A7	615 aa		13.08	□□□□□ -0.32
MATR3-231	ENST00000502394	ARL5C	A6NH57	179 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	OFD1	O75665	1012 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	ITGB3	P05106	788 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	ATIC	P31939	592 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	MLH1	P40692	756 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	CDK17	Q00537	523 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	DRAP1	Q14919	205 aa	Predicted RBP	13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	SGSM1	Q2NKQ1	1148 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	SPOPL	Q6IQ16	392 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	MFSD5	Q6N075	450 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	CNKSR3	Q6P9H4	555 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	RRAGA	Q7L523	313 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	ZNF397	Q8NF99	534 aa	Predicted RBP	13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	BEST2	Q8NFU1	509 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	SHC3	Q92529	594 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	ELMO3	Q96BJ8	720 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	NUCKS1	Q9H1E3	243 aa	Known RBP	13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	TMEM161A	Q9NX61	479 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	AIPL1	Q9NZN9	384 aa		13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.07	□□□□□ -0.32
MATR3-231	ENST00000502394	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.07	□□□□□ -0.32	3e-9	■■■□□ 15.1
MATR3-231	ENST00000502394	TTC3	P53804	2025 aa		13.06	□□□□□ -0.32
MATR3-231	ENST00000502394	LTBP2	Q14767	1821 aa		13.06	□□□□□ -0.32
MATR3-231	ENST00000502394		F8VZ95	297 aa		13.06	□□□□□ -0.32
MATR3-231	ENST00000502394	PIR	O00625	290 aa		13.06	□□□□□ -0.32

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