RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	SPEM1	Q8N4L4	309 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	IRF7	Q92985	503 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	RBM12	Q9NTZ6	932 aa	Known RBP	13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	ORC3	Q9UBD5	711 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	SDK1	Q7Z5N4	2213 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	CHURC1-FNTB	B4DL54	471 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	PODXL	O00592	558 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	SYN3	O14994	580 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	LARGE1	O95461	756 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	LRG1	P02750	347 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	KCNE1	P15382	129 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	XBP1	P17861	261 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	PROZ	P22891	400 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	RPA1	P27694	616 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	PML	P29590	882 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	HOXA6	P31267	233 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	CXCL12	P48061	93 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	FNTB	P49356	437 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	ATF7IP2	Q5U623	682 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357		Q6ZS52	159 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	TMC8	Q8IU68	726 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	DAW1	Q8N136	415 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	SHKBP1	Q8TBC3	707 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	DEPDC1B	Q8WUY9	529 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	NACC1	Q96RE7	527 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	ADPGK	Q9BRR6	497 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	DNAJC25	Q9H1X3	360 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	CDT1	Q9H211	546 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	CRISPLD1	Q9H336	500 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	CYP4F11	Q9HBI6	524 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	DAXX	Q9UER7	740 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	CIT	O14578	2027 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	EML5	Q05BV3	1969 aa		13.91	□□□□□ -0.18
LMNA-218	ENST00000502357	FRY	Q5TBA9	3013 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	ZNF197	O14709	1029 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	TRAPPC3	O43617	180 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	FCHO2	Q0JRZ9	810 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	ST3GAL1	Q11201	340 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	SIM2	Q14190	667 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	TPGS2	Q68CL5	300 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	RNF19B	Q6ZMZ0	732 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	DEPTOR	Q8TB45	409 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	C18orf25	Q96B23	403 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	SUSD3	Q96L08	255 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	ACO2	Q99798	780 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	RXFP3	Q9NSD7	469 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	CNTN3	Q9P232	1028 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	AFF4	Q9UHB7	1163 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	SPAG17	Q6Q759	2223 aa		13.9	□□□□□ -0.18
LMNA-218	ENST00000502357	MYBPHL	A2RUH7	354 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	HEPACAM2	A8MVW5	462 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	PRRG1	O14668	218 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	CNR2	P34972	360 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	SOX9	P48436	509 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	TWF1	Q12792	350 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	TEAD2	Q15562	447 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	ME3	Q16798	604 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	PRR23B	Q6ZRT6	265 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	PDZD4	Q76G19	769 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	LONP2	Q86WA8	852 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	DIS3L2	Q8IYB7	885 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	FAM160A2	Q8N612	972 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	C4orf32	Q8N8J7	132 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	NSUN7	Q8NE18	718 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	MAFF	Q9ULX9	164 aa		13.89	□□□□□ -0.19
LMNA-218	ENST00000502357	ZNF263	O14978	683 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	CHAD	O15335	359 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	LIG1	P18858	919 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	ELF1	P32519	619 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	EFNA5	P52803	228 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	LIMK1	P53667	647 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	ARPP19	P56211	112 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	SHC2	P98077	582 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	MAPK7	Q13164	816 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	CCIN	Q13939	588 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	STXBP5	Q5T5C0	1151 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	NECAB1	Q8N987	351 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	DDX12P	Q92771	950 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	CHFR	Q96EP1	664 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	CCDC43	Q96MW1	224 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	ARHGAP28	Q9P2N2	729 aa		13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-218	ENST00000502357	CACNA1G	O43497	2377 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357		H7C4K7	107 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357		M0QZQ0	153 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	JAK2	O60674	1132 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	OAZ2	O95190	189 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	MUT	P22033	750 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	RPL9	P32969	192 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	RAP1GAP	P47736	663 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	AARS	P49588	968 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	CACNB1	Q02641	598 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	PPP2R5A	Q15172	486 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	SLC10A6	Q3KNW5	377 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	CTXN3	Q4LDR2	81 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	CYP4A22	Q5TCH4	519 aa		13.87	□□□□□ -0.19
LMNA-218	ENST00000502357	PKN3	Q6P5Z2	889 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms