RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MAP2K6P52564 334 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 KIF11P52732 1056 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF131P52739 623 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FMO1Q01740 532 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZP2Q05996 745 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 DAG1Q14118 895 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLCL1Q15111 1095 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 DLGAP5Q15398 846 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC157Q569K6 752 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FIGNQ5HY92 759 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FBXO47Q5MNV8 452 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 CIAPIN1Q6FI81 312 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLBD1Q6P4A8 553 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FAM47EQ6ZV65 393 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 RTL10Q7L3V2 364 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 MILR1Q7Z6M3 343 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 RTN4RL1Q86UN2 441 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SESTD1Q86VW0 696 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 DCP2Q8IU60 420 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SPPL2CQ8IUH8 684 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FTSJ3Q8IY81 847 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 CARNMT1Q8N4J0 409 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 C7orf31Q8N865 590 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 NUP43Q8NFH3 380 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FMNL2Q96PY5 1086 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ALPK1Q96QP1 1244 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 TREX2Q9BQ50 279 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 HEPHQ9BQS7 1158 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC68Q9H2F9 335 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PRDM12Q9H4Q4 367 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 JMJD4Q9H9V9 463 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF287Q9HBT7 754 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PREBQ9HCU5 417 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PNPLA8Q9NP80 782 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 KCND1Q9NSA2 647 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 NSMCE4AQ9NXX6 385 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ORC3Q9UBD5 711 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 TBC1D29Q9UFV1 150 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 FBXL7Q9UJT9 491 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 DSEQ9UL01 958 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC39A10Q9ULF5 831 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ANGEL1Q9UNK9 670 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SIK3Q9Y2K2 1263 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ABCC11Q96J66 1382 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 AQP12BA6NM10 295 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 SCDO00767 359 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 URI1O94763 535 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 AMY2AP04746 511 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 APOA4P06727 396 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 KITP10721 976 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 MYCLP12524 364 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 AMY2BP19961 511 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 TACR1P25103 407 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 CD40P25942 277 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 AFMP43652 599 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 TDO2P48775 406 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC16A1P53985 500 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 CASP6P55212 293 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 RAB1AP62820 205 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCT2P78371 535 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 MAPK7Q13164 816 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 IL10RAQ13651 578 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 LRP8Q14114 963 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 SURF1Q15526 300 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 PKN2Q16513 984 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 ASIC2Q16515 512 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 BICRALQ6AI39 1079 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 MFSD6Q6ZSS7 791 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 NLRP10Q86W26 655 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 VSIG1Q86XK7 387 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZDHHC13Q8IUH4 622 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 MARCH10Q8NA82 808 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 TDRD7Q8NHU6 1098 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 IL31RAQ8NI17 732 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 SSH3Q8TE77 659 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 NRG4Q8WWG1 115 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 KAT5Q92993 513 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 HHIPL1Q96JK4 782 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 JMJD8Q96S16 334 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 BAG1Q99933 345 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 STK33Q9BYT3 514 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 DHX36Q9H2U1 1008 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 ACSS2Q9NR19 701 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 HAUS2Q9NVX0 235 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 LMCD1Q9NZU5 365 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 IMPACTQ9P2X3 320 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM59LQ9UK28 342 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 DBR1Q9UK59 544 aaKnown RBP4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 OGDHLQ9ULD0 1010 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 GPRASP1Q5JY77 1395 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC144AA2RUR9 1427 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms