RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 COG5Q9UP83 839 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 FRMD4BQ9Y2L6 1034 aa18.13■□□□□ 0.49
PRKCB-210ENST00000498739 ANO9A1A5B4 782 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 TNNC2P02585 160 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 ITGB3P05106 788 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 CNPP09543 421 aaKnown RBP18.12■□□□□ 0.49
PRKCB-210ENST00000498739 TNNI1P19237 187 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 BMP6P22004 513 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 FGFR3P22607 806 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 RPL13P26373 211 aaKnown RBP18.12■□□□□ 0.49
PRKCB-210ENST00000498739 KLRC2P26717 231 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 NDUFV1P49821 464 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 ADAM15Q13444 863 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 COL19A1Q14993 1142 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 NFIL3Q16649 462 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 WDR49Q8IV35 697 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 C1orf127Q8N9H9 656 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 GPT2Q8TD30 523 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 PIK3R5Q8WYR1 880 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 SUSD3Q96L08 255 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 MFSD14AQ96MC6 490 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 CGRRF1Q99675 332 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 TSG101Q99816 390 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 INTS13Q9NVM9 706 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 PTPRJQ12913 1337 aa18.12■□□□□ 0.49
PRKCB-210ENST00000498739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 PIRO00625 290 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 PSMA7O14818 248 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 GLP2RO95838 553 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 KCNA5P22460 613 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 POLR2BP30876 1174 aaKnown RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 PPP1R2P41236 205 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 CREMQ03060 361 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 ADAM9Q13443 819 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 PSMD5Q16401 504 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 CTC1Q2NKJ3 1217 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 EDRF1Q3B7T1 1238 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 CENPPQ6IPU0 288 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 KLHL10Q6JEL2 608 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 DSTYKQ6XUX3 929 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 GLYCTKQ8IVS8 523 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 GPR65Q8IYL9 337 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 TRIML1Q8N9V2 468 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 VN1R2Q8NFZ6 395 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 OR5B17Q8NGF7 314 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 LNX1Q8TBB1 728 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 POP1Q99575 1024 aaKnown RBP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 RXFP1Q9HBX9 757 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.11■□□□□ 0.49
PRKCB-210ENST00000498739 ITGA11Q9UKX5 1188 aa18.11■□□□□ 0.49
PRKCB-210ENST00000498739 TRIM49BA6NDI0 452 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 SYN3O14994 580 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 TEX28O15482 410 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 TBX10O75333 385 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 ADH1AP07327 375 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 KRT19P08727 400 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 SRGAP2BP0DMP2 458 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 RPL17P18621 184 aaKnown RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 CCNE1P24864 410 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 TAF6P49848 677 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 PMS1P54277 932 aaKnown RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 LILRA4P59901 499 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 TFF2Q03403 129 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 DUOXA2Q1HG44 320 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 PLEKHO2Q8TD55 490 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 DHTKD1Q96HY7 919 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 BARX2Q9UMQ3 279 aaPredicted RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 AGAP1Q9UPQ3 857 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 R3HCC1Q9Y3T6 440 aaKnown RBP18.1■□□□□ 0.49
PRKCB-210ENST00000498739 HCFC2Q9Y5Z7 792 aa18.1■□□□□ 0.49
PRKCB-210ENST00000498739 LRRIQ3A6PVS8 624 aaPredicted RBP18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PPP1R3GB7ZBB8 358 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 H3BQ06 376 aaPredicted RBP18.09■□□□□ 0.49
PRKCB-210ENST00000498739 M0QZQ0 153 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 SPTLC1O15269 473 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 AKAP3O75969 853 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 MBD3O95983 291 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PAX3P23760 479 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PSMC2P35998 433 aaKnown RBP18.09■□□□□ 0.49
PRKCB-210ENST00000498739 LTBRP36941 435 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 AARSP49588 968 aaKnown RBP eCLIP18.09■□□□□ 0.495e-7■■■■□ 20
PRKCB-210ENST00000498739 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 SV2CQ496J9 727 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 VARS2Q5ST30 1063 aaKnown RBP18.09■□□□□ 0.49
PRKCB-210ENST00000498739 ANKRD40Q6AI12 368 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 ANKS3Q6ZW76 656 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PPFIBP1Q86W92 1011 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.09■□□□□ 0.494e-6■■■■■ 36.3
PRKCB-210ENST00000498739 FAM186BQ8IYM0 893 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 APPL2Q8NEU8 664 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 PARD3BQ8TEW8 1205 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 EEF2KMTQ96G04 330 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 ZNF560Q96MR9 790 aa18.09■□□□□ 0.49
PRKCB-210ENST00000498739 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms