RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SFI1A8K8P3 1242 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 XPOTO43592 962 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 CEP104O60308 925 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TTLL1O95922 423 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 HARSP12081 509 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 AMPD1P23109 780 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 PTPREP23469 700 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TSPAN7P41732 249 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 STT3AP46977 705 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 UBXN2AP68543 259 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 MFSD10Q14728 455 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 EXOC3L4Q17RC7 722 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 ABCB5Q2M3G0 1257 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 APOBEC3HQ6NTF7 200 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRUNE1Q86TP1 453 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 CPXCR1Q8N123 301 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 METTL25Q8N6Q8 603 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 CEP70Q8NHQ1 597 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TBCKQ8TEA7 893 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 NAP1L4Q99733 375 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 HEPHQ9BQS7 1158 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TAOK3Q9H2K8 898 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 THAP9Q9H5L6 903 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TCP11L1Q9NUJ3 509 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 MTMR4Q9NYA4 1195 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAD2L2Q9UI95 211 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHA4Q9UN74 947 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 ABLIM1O14639 778 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 CAPN9O14815 690 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 GNA11P29992 359 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 GTF2H1P32780 548 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 CDK17Q00537 523 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 BTKQ06187 659 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 GRM4Q14833 912 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 NONOQ15233 471 aaKnown RBP eCLIP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 THOC7Q6I9Y2 204 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 VASH1Q7L8A9 365 aaPredicted RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SIX5Q8N196 739 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 REXO1Q8N1G1 1221 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 STK33Q9BYT3 514 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 ISCUQ9H1K1 167 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 VCXQ9H320 206 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 EBF3Q9H4W6 596 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP29Q9HBJ7 922 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLCO1B3Q9NPD5 702 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRCH1Q9Y2L9 728 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 H3BRB1 525 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 KLRC1P26715 233 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 HOXC13P31276 330 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 FOXN2P32314 431 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 KIF11P52732 1056 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 GK3PQ14409 553 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 NFE2Q16621 373 aaPredicted RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 AGBL2Q5U5Z8 902 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 STRIP1Q5VSL9 837 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L6PQ6QN14 398 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF365Q70YC5 407 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 DYMQ7RTS9 669 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXO27Q8NI29 283 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRRC15Q8TF66 581 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SH3KBP1Q96B97 665 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SNX27Q96L92 541 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMEM60Q9H2L4 133 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SEMA4AQ9H3S1 761 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TPK1Q9H3S4 243 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM207AQ9NSI2 230 aaPredicted RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 LUZP4Q9P127 313 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 PI4KBQ9UBF8 816 aa6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 SRPRBQ9Y5M8 271 aaKnown RBP6.13□□□□□ -1.43
SOX2-OT-218ENST00000498731 TSPAN6O43657 245 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 DGKIO75912 1065 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 GJB6O95452 261 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 KRT18P05783 430 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 FGFR4P22455 802 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 GBP1P32455 592 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ADCY7P51828 1080 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ITIH3Q06033 890 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SULT2A1Q06520 285 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 BIRC3Q13489 604 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC29A2Q14542 456 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 TBC1D10BQ4KMP7 808 aaPredicted RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRIG3Q6UXM1 1119 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 UTS2BQ765I0 119 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZBTB46Q86UZ6 589 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 SNX32Q86XE0 403 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 IFNL1Q8IU54 200 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRRC8CQ8TDW0 803 aa6.12□□□□□ -1.43
SOX2-OT-218ENST00000498731 ADAM33Q9BZ11 813 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms