RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 AUTS2Q8WXX7 1259 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 C18orf25Q96B23 403 aaPredicted RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 CBWD1Q9BRT8 395 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 VN1R3Q9BXE9 311 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 PLEKHA5Q9HAU0 1116 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 CLDND1Q9NY35 253 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 THEGQ9P2T0 379 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 STK39Q9UEW8 545 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 CPSF3Q9UKF6 684 aaKnown RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
LMNA-217ENST00000498722 MTCL1Q9Y4B5 1905 aaKnown RBP17.48■□□□□ 0.39
LMNA-217ENST00000498722 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 FSCN2O14926 492 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 PER2O15055 1255 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 MEFVO15553 781 aaPredicted RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 NRDCO43847 1150 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 CXCL14O95715 111 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 URODP06132 367 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 GARTP22102 1010 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 GTF2F1P35269 517 aaKnown RBP eCLIP17.47■□□□□ 0.39
LMNA-217ENST00000498722 CLCNKBP51801 687 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 SOX4Q06945 474 aaPredicted RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 HYAL1Q12794 435 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 FUT10Q6P4F1 479 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 HS2ST1Q7LGA3 356 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 HLA-CQ95604 372 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 UROC1Q96N76 676 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 ZBP1Q9H171 429 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 SCN1AP35498 2009 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 SF3B1O75533 1304 aaKnown RBP eCLIP17.47■□□□□ 0.393e-6■■■■■ 137.9
LMNA-217ENST00000498722 HIDE1A8MVS5 230 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 XPOTO43592 962 aaKnown RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 CALUO43852 315 aaPredicted RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 B3GAT3O94766 335 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 SOD2P04179 222 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 CTSAP10619 480 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 HOXD13P35453 343 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 FKBP3Q00688 224 aaKnown RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 EDRF1Q3B7T1 1238 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 SPECC1LQ69YQ0 1117 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 CREBRFQ8IUR6 639 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 CD302Q8IX05 232 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 B3GALT6Q96L58 329 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 CEP63Q96MT8 703 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
LMNA-217ENST00000498722 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 TUBGCP4Q9UGJ1 667 aa17.47■□□□□ 0.39
LMNA-217ENST00000498722 C2orf71A6NGG8 1288 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 PODXLO00592 558 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 CLIC2O15247 247 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 NCK2O43639 380 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 GNA14O95837 355 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 GLUD2P49448 558 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 CYP2J2P51589 502 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 TMEM132DQ14C87 1099 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 KNOP1Q1ED39 458 aaKnown RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 JADE1Q6IE81 842 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 TAS1R1Q7RTX1 841 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 CEP57Q86XR8 500 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 IRF2BP1Q8IU81 584 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.46■□□□□ 0.38
LMNA-217ENST00000498722 LRRC8AQ8IWT6 810 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 GPD1LQ8N335 351 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 MRPL43Q8N983 215 aaKnown RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 ZSWIM2Q8NEG5 633 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 DDX27Q96GQ7 796 aaKnown RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 CNOT6LQ96LI5 555 aaKnown RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 HERC2P3Q9BVR0 1158 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 AGPAT3Q9NRZ7 376 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 RBAKQ9NYW8 714 aaPredicted RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 UBQLN1Q9UMX0 589 aaKnown RBP17.46■□□□□ 0.38
LMNA-217ENST00000498722 COG5Q9UP83 839 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 NUB1Q9Y5A7 615 aa17.46■□□□□ 0.38
LMNA-217ENST00000498722 ITIH6Q6UXX5 1313 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 KIAA0391O15091 583 aaKnown RBP17.45■□□□□ 0.38
LMNA-217ENST00000498722 EXTL3O43909 919 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 IL18RAPO95256 599 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 NFICP08651 508 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 KCNA5P22460 613 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 MTIF2P46199 727 aaKnown RBP17.45■□□□□ 0.38
LMNA-217ENST00000498722 NDUFV1P49821 464 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 TFF2Q03403 129 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 UPP1Q16831 310 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 USP41Q3LFD5 358 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 FAM171A1Q5VUB5 890 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 DCLRE1AQ6PJP8 1040 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 CRELD2Q6UXH1 353 aaPredicted RBP17.45■□□□□ 0.38
LMNA-217ENST00000498722 ZNF830Q96NB3 372 aaPredicted RBP17.45■□□□□ 0.38
LMNA-217ENST00000498722 VPS16Q9H269 839 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 KCTD10Q9H3F6 313 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 UBE2ZQ9H832 354 aaPredicted RBP17.45■□□□□ 0.38
LMNA-217ENST00000498722 TAB2Q9NYJ8 693 aa17.45■□□□□ 0.38
LMNA-217ENST00000498722 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms