RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SMOC1Q9H4F8 434 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 JADE2Q9NQC1 790 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 C1orf112Q9NSG2 853 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM161AQ9NX61 479 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SLC9A2Q9UBY0 812 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 NAP1L2Q9ULW6 460 aaPredicted RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ST3GAL5Q9UNP4 418 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 IRAK3Q9Y616 596 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SLC12A7Q9Y666 1083 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 PIEZO2Q9H5I5 2752 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 EVPLQ92817 2033 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 RRN3P2A6NIE6 340 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 EIF4E1BA6NMX2 242 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 CHURC1-FNTBB4DL54 471 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SLC27A2O14975 620 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 FOXD2O60548 495 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 RPS6KA5O75582 802 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 ZNF806P0C7X5 589 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KLRC1P26715 233 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KLRC2P26717 231 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 MCM5P33992 734 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 RPS9P46781 194 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 FNTBP49356 437 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 GNAQP50148 359 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 STAT5BP51692 787 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 NAPAP54920 295 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 ACTR2P61160 394 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SWI5Q1ZZU3 235 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 CLLU1OSQ5K130 101 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 ARTNQ5T4W7 220 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 JAKMIP3Q5VZ66 844 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KIAA1211LQ6NV74 962 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 MTHFD1LQ6UB35 978 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 TMTC3Q6ZXV5 915 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 GET4Q7L5D6 327 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 LRRC43Q8N309 656 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 STAMQ92783 540 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 LZTS2Q9BRK4 669 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SDF4Q9BRK5 362 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 ELAC1Q9H777 363 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 MAN1C1Q9NR34 630 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KCNH7Q9NS40 1196 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KLK13Q9UKR3 277 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SHROOM3Q8TF72 1996 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SPAG17Q6Q759 2223 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 MTCL1Q9Y4B5 1905 aaKnown RBP6.25□□□□□ -1.41
SPTA1-209ENST00000498708 KDM3AQ9Y4C1 1321 aa6.25□□□□□ -1.41
SPTA1-209ENST00000498708 SMCO2A6NFE2 343 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 INPPL1O15357 1258 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 HYAL3O43820 417 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 XYLBO75191 536 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SSBP05455 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SPATA31D3P0C874 917 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CALM1P0DP23 149 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CALM2P0DP24 149 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CALM3P0DP25 149 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SMARCA1P28370 1054 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ALDH7A1P49419 539 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 POLGP54098 1239 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SATB1Q01826 763 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ADCY1Q08828 1119 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ITGB3BPQ13352 177 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 DSC3Q14574 896 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 BMS1Q14692 1282 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 KIZQ2M2Z5 673 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SWSAP1Q6NVH7 229 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 RSPO2Q6UXX9 243 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SYNE3Q6ZMZ3 975 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SPATA31D4Q6ZUB0 917 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 TPRG1Q6ZUI0 275 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 FAM228AQ86W67 206 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 PPFIBP1Q86W92 1011 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SKAP1Q86WV1 359 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 PROSER1Q86XN7 944 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CKAP2LQ8IYA6 745 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 FANCBQ8NB91 859 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 RNF169Q8NCN4 708 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 GLIS3Q8NEA6 775 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 CMASQ8NFW8 434 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 HELQQ8TDG4 1101 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 SMG7Q92540 1137 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 TP53INP1Q96A56 240 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ZNF707Q96C28 371 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM169Q96HH4 297 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 MAP3K14Q99558 947 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 OSMRQ99650 979 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ANO3Q9BYT9 981 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 LSG1Q9H089 658 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 AGO4Q9HCK5 861 aaKnown RBP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ZFP64Q9NPA5 681 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 ANO2Q9NQ90 1003 aa6.24□□□□□ -1.41
SPTA1-209ENST00000498708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPTA1-209ENST00000498708 PCDHA2Q9Y5H9 948 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms