RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FXR1P51114 621 aaKnown RBP eCLIP3.71□□□□□ -1.82
RIF1-212ENST00000498041 HK3P52790 923 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 GTF2H3Q13889 308 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 BEAN1Q3B7T3 259 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 SPDYE7PQ495Y7 208 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 ATAT1Q5SQI0 421 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 LY6G5CQ5SRR4 150 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 IFIT1BQ5T764 474 aaKnown RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 ARMC6Q6NXE6 501 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 FOXR2Q6PJQ5 311 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 SLC4A10Q6U841 1118 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 LRRC55Q6ZSA7 311 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 MRGPREQ86SM8 312 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 MAPKAPK5Q8IW41 473 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 AOPEPQ8N6M6 819 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 TBC1D15Q8TC07 691 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 JDP2Q8WYK2 163 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 AIFM3Q96NN9 605 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 PNKPQ96T60 521 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 GNL3LQ9NVN8 582 aaKnown RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 SIDT1Q9NXL6 827 aaKnown RBP3.71□□□□□ -1.82
RIF1-212ENST00000498041 JKAMPQ9P055 326 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 PCDHA3Q9Y5H8 950 aa3.71□□□□□ -1.82
RIF1-212ENST00000498041 LRRC14BA6NHZ5 514 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NT5C1B-RDH14C9J2C7 533 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 F2RL2O00254 374 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 AP1G1O43747 822 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 AGFG2O95081 481 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 GPANK1O95872 356 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 U2AF1L5P0DN76 240 aaPredicted RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 HSPA6P17066 643 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 FGFR4P22455 802 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 DDX6P26196 483 aaKnown RBP eCLIP3.7□□□□□ -1.82
RIF1-212ENST00000498041 MAP2K6P52564 334 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NOMO3P69849 1222 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 U2AF1Q01081 240 aaKnown RBP eCLIP3.7□□□□□ -1.827e-6■■■□□ 18.7
RIF1-212ENST00000498041 RESTQ13127 1097 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NOGQ13253 232 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 PPP2R5AQ15172 486 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 PTPAQ15257 358 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NFE2Q16621 373 aaPredicted RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 FLYWCH1Q4VC44 716 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NOMO2Q5JPE7 1267 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 UTP14CQ5TAP6 766 aaKnown RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 KCNV1Q6PIU1 500 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 ZNF365Q70YC5 407 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 HEATR3Q7Z4Q2 680 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 TPH2Q8IWU9 490 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 RAVER1Q8IY67 606 aaKnown RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 GRAMD1CQ8IYS0 662 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 CHPFQ8IZ52 775 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 TMEM132CQ8N3T6 1108 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 CPEB3Q8NE35 698 aaKnown RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 PROKR1Q8TCW9 393 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 C1GALT1C1Q96EU7 318 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 MARS2Q96GW9 593 aaKnown RBP3.7□□□□□ -1.82
RIF1-212ENST00000498041 FAM167AQ96KS9 214 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 ZSWIM1Q9BR11 485 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 SLC12A5Q9H2X9 1139 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 WDCPQ9H6R7 721 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NMRK2Q9NPI5 230 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 RNF181Q9P0P0 153 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 DKK2Q9UBU2 259 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 TCEAL9Q9UHQ7 104 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 MAP3K2Q9Y2U5 619 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 NOX1Q9Y5S8 564 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 HS3ST4Q9Y661 456 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 EID1Q9Y6B2 187 aa3.7□□□□□ -1.82
RIF1-212ENST00000498041 AATKQ6ZMQ8 1374 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 CENPVL1A0A0U1RR11 272 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 MARCH11A6NNE9 402 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 LPXNO60711 386 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 ANXA1P04083 346 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 ELANEP08246 267 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 GNAI3P08754 354 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 LPOP22079 712 aaPredicted RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 PRDX5P30044 214 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 IL12RB1P42701 662 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 GNAI1P63096 354 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 HSD11B2P80365 405 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 GUCY1B3Q02153 619 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 OCA2Q04671 838 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 SLFN5Q08AF3 891 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 ZNF267Q14586 743 aaPredicted RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 CCDC93Q567U6 631 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 CCDC157Q569K6 752 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 B3GNTL1Q67FW5 361 aaPredicted RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 CXorf57Q6NSI4 855 aaKnown RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 PDSS2Q86YH6 399 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 ARHGEF19Q8IW93 802 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 ULK2Q8IYT8 1036 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 FAM43AQ8N2R8 423 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 AMER2Q8N7J2 671 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 SLC35G2Q8TBE7 412 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 DIS3LQ8TF46 1054 aaKnown RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 NEU4Q8WWR8 484 aaPredicted RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 LARP4BQ92615 738 aaKnown RBP3.69□□□□□ -1.82
RIF1-212ENST00000498041 CHFRQ96EP1 664 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 BOD1Q96IK1 185 aa3.69□□□□□ -1.82
RIF1-212ENST00000498041 CDK5RAP3Q96JB5 506 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms