RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 EPCAMP16422 314 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 FGFR3P22607 806 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 TKTP29401 623 aaKnown RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 CLCN4P51793 760 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 UBE2HP62256 183 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 KCNC3Q14003 757 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 SURF1Q15526 300 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 SNRNP35Q16560 246 aaKnown RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 ANKS3Q6ZW76 656 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 CBWD2Q8IUF1 395 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 GLYCTKQ8IVS8 523 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 APPL2Q8NEU8 664 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 ADAMTS19Q8TE59 1207 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 SLC22A17Q8WUG5 538 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 FNIP2Q9P278 1114 aa12.71□□□□□ -0.37
MRPL55-234ENST00000497758 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
MRPL55-234ENST00000497758 NCOR1O75376 2440 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-234ENST00000497758 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
MRPL55-234ENST00000497758 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 PAX3P23760 479 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 C9orf57Q5W0N0 161 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 C12orf56Q8IXR9 622 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 TMEM130Q8N3G9 435 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 SMRP1Q8NCR6 262 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 LNX1Q8TBB1 728 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-234ENST00000497758 SUSD3Q96L08 255 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 APOL5Q9BWW9 433 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
MRPL55-234ENST00000497758 MAPK8IP1Q9UQF2 711 aa12.7□□□□□ -0.38
MRPL55-234ENST00000497758 BDP1A6H8Y1 2624 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 H7C4K7 107 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 PDXKO00764 312 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 MBTPS2O43462 519 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 TNNC2P02585 160 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 NR3C1P04150 777 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 IL9P15248 144 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 RARS2Q5T160 578 aaKnown RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 USP37Q86T82 979 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 ANKRD36BP1Q96IX9 119 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 ZNF560Q96MR9 790 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 GBP4Q96PP9 640 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 SFXN1Q9H9B4 322 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 MAN1C1Q9NR34 630 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 USP15Q9Y4E8 981 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
MRPL55-234ENST00000497758 PDCD11Q14690 1871 aaKnown RBP12.69□□□□□ -0.38
MRPL55-234ENST00000497758 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 PIRO00625 290 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 PPEF2O14830 753 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 TGM5O43548 720 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 C1RP00736 705 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 KRT19P08727 400 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 SPATA31D3P0C874 917 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 ODC1P11926 461 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 TNNI1P19237 187 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
MRPL55-234ENST00000497758 OR1D2P34982 312 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 PNPLA4P41247 253 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 TAF6P49848 677 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 WNT7BP56706 349 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 LILRA4P59901 499 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 ITIH3Q06033 890 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
MRPL55-234ENST00000497758 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 SV2CQ496J9 727 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-234ENST00000497758 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-234ENST00000497758 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
MRPL55-234ENST00000497758 SPATA31D4Q6ZUB0 917 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms