RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
CTDSP1-214ENST00000497677 UBQLN1Q9UMX0 589 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-214ENST00000497677 C5orf42Q9H799 3197 aa17.33■□□□□ 0.37
CTDSP1-214ENST00000497677 LOC730098B7Z3J9 87 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 KLRC4O43908 158 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GLUD1P00367 558 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 NFICP08651 508 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GARTP22102 1010 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 NDUFA8P51970 172 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 WNT7BP56706 349 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 CREMQ03060 361 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 MRPL58Q14197 206 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 PSMD5Q16401 504 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 TMC5Q6UXY8 1006 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GPR149Q86SP6 731 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GLYCTKQ8IVS8 523 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 SYCP3Q8IZU3 236 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 SUSD3Q96L08 255 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 MAN1C1Q9NR34 630 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 MTRRQ9UBK8 725 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 DERAQ9Y315 318 aa17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-214ENST00000497677 BDP1A6H8Y1 2624 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 PPEF2O14830 753 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 EIF3DO15371 548 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 TGFB1I1O43294 461 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 TBC1D4O60343 1298 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 ZNF202O95125 648 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 CAVIN2O95810 425 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 CCDC192P0DO97 292 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 SSTR3P32745 418 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 MRE11P49959 708 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 RAB33AQ14088 237 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 SCFD1Q8WVM8 642 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 POP1Q99575 1024 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 TSPY26PQ9H489 355 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 C2CD2Q9Y426 696 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 BACE2Q9Y5Z0 518 aa17.32■□□□□ 0.36
CTDSP1-214ENST00000497677 ANO9A1A5B4 782 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 SYN3O14994 580 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 RFPL2O75678 378 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 ATAT1Q5SQI0 421 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 ANKS3Q6ZW76 656 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 STXBP4Q6ZWJ1 553 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 KREMEN2Q8NCW0 462 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 ZNF707Q96C28 371 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 SAAL1Q96ER3 474 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 NECTIN4Q96NY8 510 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 FAM213AQ9BRX8 229 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 EPHX3Q9H6B9 360 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
CTDSP1-214ENST00000497677 PI4K2BG5E9Z4 385 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 M0QZQ0 153 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 PIRO00625 290 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 XPOTO43592 962 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 EXTL3O43909 919 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 OR1D2P34982 312 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 MTHFRP42898 656 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 TMEM132DQ14C87 1099 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 BMT2Q1RMZ1 405 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 VARS2Q5ST30 1063 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 SLC8B1Q6J4K2 584 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 EFCAB13Q8IY85 973 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 BEST2Q8NFU1 509 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 RPGRIP1Q96KN7 1286 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 RHOBTB2Q9BYZ6 727 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 PCIF1Q9H4Z3 704 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 DPP7Q9UHL4 492 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
CTDSP1-214ENST00000497677 CCDC195A0A1B0GUA6 201 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 GOLGA8IPA6NC78 632 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 GOLGA8JA6NMD2 632 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 SPTLC1O15269 473 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 IL18RAPO95256 599 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 LILRA4P59901 499 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 STK4Q13043 487 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 ARMCX5Q6P1M9 558 aa17.29■□□□□ 0.36
CTDSP1-214ENST00000497677 SASS6Q6UVJ0 657 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms