RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 KCNE1P15382 129 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 BMP8BP34820 402 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 GSDMDP57764 484 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 SMAD3P84022 425 aaKnown RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 LRMPQ12912 555 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 TCP11X2Q5H9J9 407 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 OVOS1Q6IE37 1185 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 JADE1Q6IE81 842 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CES5AQ6NT32 575 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 SPATA18Q8TC71 538 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CCDC113Q9H0I3 377 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 MINDY3Q9H8M7 445 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 FANCLQ9NW38 375 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 ADAM28Q9UKQ2 775 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 HES2Q9Y543 173 aa9.25□□□□□ -0.93
U2AF1-212ENST00000496462 CXCL14O95715 111 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 FAM163BP0C2L3 166 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 FGFR1P11362 822 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 ITGB8P26012 769 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 PDE6CP51160 858 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 Q7L0L9 218 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 ITIH5Q86UX2 942 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 CNGA4Q8IV77 575 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TMEM192Q8IY95 271 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TTPALQ9BTX7 342 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TLE6Q9H808 572 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 MYH7BA7E2Y1 1941 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM49BA6NDI0 452 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TNFAIP3P21580 790 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 BMPR1AP36894 532 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 CETN2P41208 172 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 FMO5P49326 533 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TUFMP49411 452 aaKnown RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 ASIC2Q16515 512 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 TADA2BQ86TJ2 420 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 HEXIM2Q96MH2 286 aaKnown RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 LRRC4Q9HBW1 653 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 SART1O43290 800 aaKnown RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 CCP110O43303 1012 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 CSPG5O95196 566 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 FERP16591 822 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 ARHGAP44Q17R89 818 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 AAK1Q2M2I8 961 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 SEZ6Q53EL9 994 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 EPM2AIP1Q7L775 607 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 DEFB123Q8N688 67 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 PARD3BQ8TEW8 1205 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 MTMR12Q9C0I1 747 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 BZW2Q9Y6E2 419 aaKnown RBP9.24□□□□□ -0.93
U2AF1-212ENST00000496462 STYXL1Q9Y6J8 313 aa9.24□□□□□ -0.93
U2AF1-212ENST00000496462 KPNA7A9QM74 516 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 SOX1O00570 391 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM49P0CI25 452 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 TRIM49CP0CI26 452 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 NAP1L1P55209 391 aaKnown RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 BCAR1P56945 870 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 FAM189BP81408 668 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 DSC3Q14574 896 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 ARHGAP15Q53QZ3 475 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 ZFYVE27Q5T4F4 411 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 FAXDC2Q96IV6 333 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 NT5C1AQ9BXI3 368 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 POLIQ9UNA4 740 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 PARP14Q460N5 1801 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 TYMPP19971 482 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 NOP14P78316 857 aaKnown RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 CYP4A22Q5TCH4 519 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 FUT10Q6P4F1 479 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 KCNN1Q92952 543 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 UBE2TQ9NPD8 197 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 IFNKQ9P0W0 207 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 AKR1B10O60218 316 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 CYLC1P35663 651 aaPredicted RBP9.23□□□□□ -0.93
U2AF1-212ENST00000496462 EPHB3P54753 998 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 PSMD5Q16401 504 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 SCARA5Q6ZMJ2 495 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 ADGRF2Q8IZF7 708 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 SPATA20Q8TB22 786 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 SENP8Q96LD8 212 aa9.23□□□□□ -0.93
U2AF1-212ENST00000496462 C2CD2LO14523 706 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 DPYSL4O14531 572 aa9.22□□□□□ -0.93
U2AF1-212ENST00000496462 ENOX2Q16206 610 aaKnown RBP9.22□□□□□ -0.93
U2AF1-212ENST00000496462 SFMBT2Q5VUG0 894 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms