RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ZNF560Q96MR9 790 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 PAAF1Q9BRP4 392 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 MTMR12Q9C0I1 747 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 TLR9Q9NR96 1032 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 INTS13Q9NVM9 706 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 MARCH5Q9NX47 278 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 ARMCX3Q9UH62 379 aaPredicted RBP10.45□□□□□ -0.74
PRPF3-207ENST00000496202 ITGA11Q9UKX5 1188 aa10.45□□□□□ -0.74
PRPF3-207ENST00000496202 ARHGEF37A1IGU5 675 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 LRRIQ3A6PVS8 624 aaPredicted RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 F8W810 466 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TMEM189-UBE2V1I3L0A0 370 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 STX10O60499 249 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 GNA14O95837 355 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 ITGB3P05106 788 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 URODP06132 367 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PNPLA4P41247 253 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 AP3M2P53677 418 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 WNT7BP56706 349 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 BFSP1Q12934 665 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 ZBTB6Q15916 424 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TIGD5Q53EQ6 642 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 DCAF17Q5H9S7 520 aaPredicted RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PLPP4Q5VZY2 271 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PDE12Q6L8Q7 609 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TMC7Q7Z402 723 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 FILIP1Q7Z7B0 1213 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TMEM173Q86WV6 379 aaPredicted RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 FAM114A1Q8IWE2 563 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 ZC3H3Q8IXZ2 948 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 VPS52Q8N1B4 723 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 MICALL1Q8N3F8 863 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 OR5B17Q8NGF7 314 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 MYLIPQ8WY64 445 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PPP2R3CQ969Q6 453 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 MRPL38Q96DV4 380 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 DUSP9Q99956 384 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TCF25Q9BQ70 676 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 HERC2P3Q9BVR0 1158 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 SRRTQ9BXP5 876 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 NAT10Q9H0A0 1025 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
PRPF3-207ENST00000496202 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 TRANK1O15050 2925 aa10.44□□□□□ -0.74
PRPF3-207ENST00000496202 PTPRJQ12913 1337 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 SYCE3A1L190 88 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 SOD2P04179 222 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 TRIM49P0CI25 452 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 TRIM49CP0CI26 452 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 PAX3P23760 479 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 POLR2BP30876 1174 aaKnown RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 GLUD2P49448 558 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 TAF6P49848 677 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 RBP5P82980 135 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 ENPEPQ07075 957 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 MYO1EQ12965 1108 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 TRPC3Q13507 836 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 SMC1AQ14683 1233 aaKnown RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 USP41Q3LFD5 358 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 SV2CQ496J9 727 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 FAM171A1Q5VUB5 890 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 C9orf57Q5W0N0 161 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 DSTYKQ6XUX3 929 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 TRAPPC11Q7Z392 1133 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 CEP57Q86XR8 500 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 CREBRFQ8IUR6 639 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 C1orf127Q8N9H9 656 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 FAM84AQ96KN4 292 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 GUCD1Q96NT3 240 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 POP1Q99575 1024 aaKnown RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 MMRN2Q9H8L6 949 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 NGRNQ9NPE2 291 aaKnown RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 MRPL17Q9NRX2 175 aaKnown RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 LMCD1Q9NZU5 365 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 MAGEC2Q9UBF1 373 aaPredicted RBP10.43□□□□□ -0.74
PRPF3-207ENST00000496202 AGAP1Q9UPQ3 857 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 SSX2IPQ9Y2D8 614 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 ATG2AQ2TAZ0 1938 aa10.43□□□□□ -0.74
PRPF3-207ENST00000496202 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.42□□□□□ -0.74
PRPF3-207ENST00000496202 ANO9A1A5B4 782 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 I3L4J1 428 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 C2CD2LO14523 706 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 PPEF2O14830 753 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 IKBKBO14920 756 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 DNAJB1P25685 340 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 PIK3CAP42336 1068 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 BRCC3P46736 316 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 DLG4P78352 724 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 CREMQ03060 361 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 ZSCAN23Q3MJ62 389 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 PDXDC1Q6P996 788 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
PRPF3-207ENST00000496202 C11orf57Q6ZUT1 292 aaPredicted RBP10.42□□□□□ -0.74
PRPF3-207ENST00000496202 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 TMEM130Q8N3G9 435 aa10.42□□□□□ -0.74
PRPF3-207ENST00000496202 LRRC52Q8N7C0 313 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms