RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 PIK3AP1Q6ZUJ8 805 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 ABCA7Q8IZY2 2146 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 FAM184AQ8NB25 1140 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 RNF149Q8NC42 400 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 PSPC1Q8WXF1 523 aaKnown RBP11.34□□□□□ -0.59
C9orf78-207ENST00000495934 SLC7A3Q8WY07 619 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 GJA10Q969M2 543 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 TMEM143Q96AN5 459 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 ZC3H10Q96K80 434 aaKnown RBP11.34□□□□□ -0.59
C9orf78-207ENST00000495934 ZSWIM3Q96MP5 696 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 KLK13Q9UKR3 277 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.34□□□□□ -0.59
C9orf78-207ENST00000495934 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 KIF26AQ9ULI4 1882 aaPredicted RBP11.34□□□□□ -0.59
C9orf78-207ENST00000495934 NCANO14594 1321 aa11.34□□□□□ -0.59
C9orf78-207ENST00000495934 ZMYM2Q9UBW7 1377 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 CCDC163A0A0D9SF12 145 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
C9orf78-207ENST00000495934 ZNF197O14709 1029 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 AKAP3O75969 853 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.6
C9orf78-207ENST00000495934 CCR2P41597 374 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 CREB5Q02930 508 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 ELAVL2Q12926 359 aaKnown RBP11.33□□□□□ -0.6
C9orf78-207ENST00000495934 TXNDC11Q6PKC3 985 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 ANO5Q75V66 913 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 PROSER1Q86XN7 944 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 MFSD6LQ8IWD5 586 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 DEFB124Q8NES8 71 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 SLC5A5Q92911 643 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-207ENST00000495934 C8orf33Q9H7E9 229 aaPredicted RBP11.33□□□□□ -0.6
C9orf78-207ENST00000495934 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 PARP2Q9UGN5 583 aa11.33□□□□□ -0.6
C9orf78-207ENST00000495934 CCDC194A0A1B0GVG4 234 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 HEPACAM2A8MVW5 462 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 SPECC1L-ADORA2AF8WAN1 911 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 SLC37A4O43826 429 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 MICAL2O94851 1124 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 CAVIN2O95810 425 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 SYT1P21579 422 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 CTHP32929 405 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 NPEPPSP55786 919 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 SPIRE1Q08AE8 756 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 CCINQ13939 588 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 TRIM29Q14134 588 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 PON2Q15165 354 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 YAF2Q8IY57 180 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 TMEM9BQ9NQ34 198 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-207ENST00000495934 THADAQ6YHU6 1953 aa11.32□□□□□ -0.6
C9orf78-207ENST00000495934 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PRRG1O14668 218 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PSMD10O75832 226 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 NPTXRO95502 500 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PI4KAP42356 2102 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PSMC5P62195 406 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 ELF2Q15723 593 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 Q4G0T1 1027 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 CYP4A22Q5TCH4 519 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 PKN3Q6P5Z2 889 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 MOXD1Q6UVY6 613 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 NEK8Q86SG6 692 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 RALGPS2Q86X27 583 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 NOSTRINQ8IVI9 506 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 ZSCAN18Q8TBC5 510 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 ETNPPLQ8TBG4 499 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
C9orf78-207ENST00000495934 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 SLC8A2Q9UPR5 921 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 GON4LQ3T8J9 2241 aa11.31□□□□□ -0.6
C9orf78-207ENST00000495934 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
C9orf78-207ENST00000495934 CDX4O14627 284 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-207ENST00000495934 CHADO15335 359 aa11.3□□□□□ -0.6
C9orf78-207ENST00000495934 ASAP2O43150 1006 aa11.3□□□□□ -0.6
C9orf78-207ENST00000495934 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
C9orf78-207ENST00000495934 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms