RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	TMTC2	Q8N394	836 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	BOLL	Q8N9W6	283 aa	Known RBP	5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	OR2I1P	Q8NGU4	316 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	SSH1	Q8WYL5	1049 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	NACC2	Q96BF6	587 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	AIFM2	Q9BRQ8	373 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	UNKL	Q9H9P5	680 aa	Known RBP	5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	KIAA1586	Q9HCI6	787 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	SAP30BP	Q9UHR5	308 aa	Known RBP	5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	INTU	Q9ULD6	942 aa		5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	LAS1L	Q9Y4W2	734 aa	Known RBP	5.83	□□□□□ -1.48
CCDC66-222	ENST00000494672	PHLDB1	Q86UU1	1377 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	SALL3	Q9BXA9	1300 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	CCDC78	A2IDD5	438 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	KIAA0391	O15091	583 aa	Known RBP	5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	PTH2R	P49190	550 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	RARRES1	P49788	294 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	MMP14	P50281	582 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	VAV2	P52735	878 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	MRPS35	P82673	323 aa	Known RBP	5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	DACT2	Q5SW24	774 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	RHOT1	Q8IXI2	618 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	ZGPAT	Q8N5A5	531 aa	Known RBP	5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	PPM1N	Q8N819	430 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	TBC1D15	Q8TC07	691 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	NRG4	Q8WWG1	115 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	DPF2	Q92785	391 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	PRDM13	Q9H4Q3	707 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	MCM8	Q9UJA3	840 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	TNFRSF18	Q9Y5U5	241 aa		5.82	□□□□□ -1.48
CCDC66-222	ENST00000494672	WAS	P42768	502 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	CTXN1	P60606	82 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	NOMO3	P69849	1222 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	SIM1	P81133	766 aa	Predicted RBP	5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	ATP8B2	P98198	1209 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	KRTAP1-1	Q07627	177 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	CLUL1	Q15846	466 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	NOMO2	Q5JPE7	1267 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	SPATA5L1	Q9BVQ7	753 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	ALG13	Q9NP73	1137 aa	Known RBP	5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	SLC5A4	Q9NY91	659 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	RIPOR2	Q9Y4F9	1068 aa		5.81	□□□□□ -1.48
CCDC66-222	ENST00000494672	CDHR4	A6H8M9	788 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	TRIM75P	A6NK02	468 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	RRP9	O43818	475 aa	Known RBP	5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	PGM2L1	Q6PCE3	622 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	RSPH3	Q86UC2	560 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	LNX2	Q8N448	690 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	FAM98A	Q8NCA5	519 aa	Known RBP	5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	HEPH	Q9BQS7	1158 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	LRFN3	Q9BTN0	628 aa		5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	PUS7L	Q9H0K6	701 aa	Known RBP	5.8	□□□□□ -1.48
CCDC66-222	ENST00000494672	TRGV11	A0A075B6L2	103 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	C1R	P00736	705 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	ZNF37A	P17032	561 aa	Predicted RBP	5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	CACNA2D1	P54289	1103 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	SP5	Q6BEB4	398 aa	Predicted RBP	5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	NOL8	Q76FK4	1167 aa	Known RBP	5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	MIGA2	Q7L4E1	593 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	ACTRT2	Q8TDY3	377 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	TRIM44	Q96DX7	344 aa	Predicted RBP	5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	TDP1	Q9NUW8	608 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	KCTD5	Q9NXV2	234 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	FOXJ2	Q9P0K8	574 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	HSFX1	Q9UBD0	423 aa		5.79	□□□□□ -1.48
CCDC66-222	ENST00000494672	PEX1	O43933	1283 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	HAUS5	O94927	633 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	IGLV2-14	P01704	120 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	MTHFD1	P11586	935 aa	Known RBP	5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	POU3F3	P20264	500 aa	Predicted RBP	5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	LMO1	P25800	156 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	IL12RB1	P42701	662 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	SLC16A1	P53985	500 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	CALD1	Q05682	793 aa	Known RBP	5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	GEN1	Q17RS7	908 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	FAM9B	Q8IZU0	186 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	CNTD1	Q8N815	330 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	SEMA4G	Q9NTN9	838 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	MKS1	Q9NXB0	559 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	SLC17A6	Q9P2U8	582 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	DCAF1	Q9Y4B6	1507 aa		5.78	□□□□□ -1.48
CCDC66-222	ENST00000494672	TTC36	A6NLP5	189 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	CDC42EP1	Q00587	391 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	SLFN5	Q08AF3	891 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	PABPC1L	Q4VXU2	614 aa	Known RBP	5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	COLEC12	Q5KU26	742 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	EGFLAM	Q63HQ2	1017 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	NECAB2	Q7Z6G3	386 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	ARHGEF25	Q86VW2	580 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	ANKRD13A	Q8IZ07	590 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672		Q8NA96	180 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	SSH3	Q8TE77	659 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	HDAC10	Q969S8	669 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	TMX3	Q96JJ7	454 aa		5.77	□□□□□ -1.49
CCDC66-222	ENST00000494672	PDLIM2	Q96JY6	352 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms