RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 TEKT3Q9BXF9 490 aa7.56□□□□□ -1.2
FN1-225ENST00000494446 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
FN1-225ENST00000494446 GLT8D2Q9H1C3 349 aa7.56□□□□□ -1.2
FN1-225ENST00000494446 IL25Q9H293 177 aa7.56□□□□□ -1.2
FN1-225ENST00000494446 RCAN3Q9UKA8 241 aa7.56□□□□□ -1.2
FN1-225ENST00000494446 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
FN1-225ENST00000494446 PLXND1Q9Y4D7 1925 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 I3L4J1 428 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 INO80B-WBP1J3KQ70 363 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 J3QKU1 62 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 TK2O00142 265 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 DPYSL4O14531 572 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 ADAMTS3O15072 1205 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 ARHGAP6O43182 974 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 PRC1O43663 620 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 RNF40O75150 1001 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 SEC24AO95486 1093 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 APBB3O95704 486 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 ENGP17813 658 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 FGFR3P22607 806 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 TKTP29401 623 aaKnown RBP7.55□□□□□ -1.2
FN1-225ENST00000494446 ROR1Q01973 937 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 PTH1RQ03431 593 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 FCHO2Q0JRZ9 810 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 GRSF1Q12849 480 aaKnown RBP eCLIP7.55□□□□□ -1.2
FN1-225ENST00000494446 USP39Q53GS9 565 aaKnown RBP7.55□□□□□ -1.2
FN1-225ENST00000494446 PMS2CLQ68D20 193 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 FSTL4Q6MZW2 842 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 CCNI2Q6ZMN8 369 aaPredicted RBP7.55□□□□□ -1.2
FN1-225ENST00000494446 ANKS3Q6ZW76 656 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 TMTC2Q8N394 836 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 HDDC3Q8N4P3 179 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 PNPLA1Q8N8W4 532 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 RIT2Q99578 217 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 TPSD1Q9BZJ3 242 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 GPR88Q9GZN0 384 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 ASAH2Q9NR71 780 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 BARHL2Q9NY43 387 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 CEP72Q9P209 647 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 INSL5Q9Y5Q6 135 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 BACE2Q9Y5Z0 518 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 SLC12A7Q9Y666 1083 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
FN1-225ENST00000494446 CITO14578 2027 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 COL6A6A6NMZ7 2263 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 PTPRQQ9UMZ3 2332 aa7.55□□□□□ -1.2
FN1-225ENST00000494446 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 ATXN7O15265 892 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 ASAP2O43150 1006 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 ABLIM3O94929 683 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 EGFP01133 1207 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 PRKCBP05771 671 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 THP07101 528 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 ARF4P18085 180 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 BCKDHBP21953 392 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 ATXN3P54252 364 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 ITPRIPL2Q3MIP1 535 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 TMEM196Q5HYL7 178 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 SLC27A1Q6PCB7 646 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 C11orf74Q86VG3 221 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 ARID3BQ8IVW6 561 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 TCEAL8Q8IYN2 117 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 ZNF843Q8N446 348 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 RDM1Q8NG50 284 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 EXOC6Q8TAG9 804 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 SHKBP1Q8TBC3 707 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 TCP11Q8WWU5 503 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 SLC5A5Q92911 643 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 LENG9Q96B70 501 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 DDX27Q96GQ7 796 aaKnown RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 CEP170P1Q96L14 293 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 GTPBP2Q9BX10 602 aaKnown RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
FN1-225ENST00000494446 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 MBD1Q9UIS9 605 aaPredicted RBP7.54□□□□□ -1.2
FN1-225ENST00000494446 ANK1P16157 1881 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 PCDH15Q96QU1 1955 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
FN1-225ENST00000494446 MYO18AQ92614 2054 aaKnown RBP7.53□□□□□ -1.2
FN1-225ENST00000494446 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 hCG_1984214I3L0E3 225 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 PTGESO14684 152 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 B4GALT5O43286 388 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 B3GAT3O94766 335 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 CFIP05156 583 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 ATF2P15336 505 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 CIITAP33076 1130 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 BRCC3P46736 316 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 PTENP60484 403 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 PSMC5P62195 406 aa7.53□□□□□ -1.2
FN1-225ENST00000494446 TWF1Q12792 350 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms