RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 GDAP1Q8TB36 358 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 TBC1D5Q92609 795 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 CUL5Q93034 780 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 FSD1Q9BTV5 496 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 TAF1DQ9H5J8 278 aaPredicted RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 ERVMER34-1Q9H9K5 563 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PIDD1Q9HB75 910 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 GMPR2Q9P2T1 348 aaKnown RBP7.47□□□□□ -1.21
SNX13-210ENST00000494402 MORF4L1Q9UBU8 362 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 ADGRE2Q9UHX3 823 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 MOSPD1Q9UJG1 213 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 FBXL7Q9UJT9 491 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 AP4E1Q9UPM8 1137 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PCDHA3Q9Y5H8 950 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 PCDHA13Q9Y5I0 950 aa7.47□□□□□ -1.21
SNX13-210ENST00000494402 GPR25O00155 361 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 NDC80O14777 642 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 PSMA7O14818 248 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 SGTAO43765 313 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 SRGAP2O75044 1071 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ACTL6BO94805 426 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 DLGAP3O95886 979 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ATP5BP06576 529 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 COL6A2P12110 1019 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 LAMP2P13473 410 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 TGM1P22735 817 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 PSMA4P25789 261 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 ABCD3P28288 659 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 CASQ1P31415 396 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ACSL1P33121 698 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 HADHAP40939 763 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 BCL6P41182 706 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 LIMK1P53667 647 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 HMGN5P82970 282 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 TRIM25Q14258 630 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 COG2Q14746 738 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 BAK1Q16611 211 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ATG16L1Q676U5 607 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 MBLAC2Q68D91 279 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 SLC22A25Q6T423 547 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 KLHL24Q6TFL4 600 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 THNSL1Q8IYQ7 743 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 LRRC71Q8N4P6 559 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 TMEM57Q8N5G2 664 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 GLIS1Q8NBF1 620 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 OR6Y1Q8NGX8 325 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 OR14C36Q8NHC7 312 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 MOSPD2Q8NHP6 518 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 STON2Q8WXE9 905 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 CEP95Q96GE4 821 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 FNBP1Q96RU3 617 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ITPAQ9BY32 194 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 MAGEB5Q9BZ81 275 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 PABPC3Q9H361 631 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 NOD2Q9HC29 1040 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 SEPT11Q9NVA2 429 aaKnown RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 COMMD8Q9NX08 183 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 RGL1Q9NZL6 768 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 ZNF215Q9UL58 517 aaPredicted RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 ZNF281Q9Y2X9 895 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 USP15Q9Y4E8 981 aaPredicted RBP7.46□□□□□ -1.22
SNX13-210ENST00000494402 CDY2AQ9Y6F7 541 aa7.46□□□□□ -1.22
SNX13-210ENST00000494402 SLC35F4A4IF30 521 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 FCHO1O14526 889 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 LRRN2O75325 713 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 APOL3O95236 402 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 GUCA1CO95843 209 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 EEF2P13639 858 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 GSPT1P15170 499 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 KCNC1P48547 511 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 CSE1LP55060 971 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 AP2B1P63010 937 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 SF3B3Q15393 1217 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 DUSP28Q4G0W2 176 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 ARHGAP15Q53QZ3 475 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 KHDC1LQ5JSQ8 128 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 CATSPEREQ5SY80 951 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 ATPAF1Q5TC12 328 aaPredicted RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 SLC44A2Q8IWA5 706 aaPredicted RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 DIS3L2Q8IYB7 885 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 GSDMBQ8TAX9 411 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 UTP15Q8TED0 518 aaKnown RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 KBTBD7Q8WVZ9 684 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 LRRC46Q96FV0 321 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 MRGPRX1Q96LB2 322 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 SAMD11Q96NU1 681 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 C7orf25Q9BPX7 421 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 METTL22Q9BUU2 404 aaPredicted RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 TRIM5Q9C035 493 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 TWSG1Q9GZX9 223 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 GREM2Q9H772 168 aa7.45□□□□□ -1.22
SNX13-210ENST00000494402 EPB41L4AQ9HCS5 686 aaPredicted RBP7.45□□□□□ -1.22
SNX13-210ENST00000494402 LMTK3Q96Q04 1460 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 SYNJ2BP-COX16A0A087WUM0 186 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 UBA6A0AVT1 1052 aaPredicted RBP7.44□□□□□ -1.22
SNX13-210ENST00000494402 TRIM43BA6NCK2 446 aa7.44□□□□□ -1.22
SNX13-210ENST00000494402 AGAP14A8MT82 685 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms