RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 KRBA2Q6ZNG9 492 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 TSHZ1Q6ZSZ6 1077 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 ZNF572Q7Z3I7 529 aaPredicted RBP2.84□□□□□ -1.95
PTPN12-212ENST00000494248 PEG10Q86TG7 708 aaKnown RBP2.84□□□□□ -1.95
PTPN12-212ENST00000494248 AHI1Q8N157 1196 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 NXPE1Q8N323 547 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 SEMA6DQ8NFY4 1073 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 PNISRQ8TF01 805 aaKnown RBP2.84□□□□□ -1.95
PTPN12-212ENST00000494248 CHTF18Q8WVB6 975 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 MRFAP1L1Q96HT8 127 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 ANO3Q9BYT9 981 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 PIF1Q9H611 641 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 ELOVL5Q9NYP7 299 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 NOC2LQ9Y3T9 749 aaKnown RBP2.84□□□□□ -1.95
PTPN12-212ENST00000494248 CDY2AQ9Y6F7 541 aa2.84□□□□□ -1.95
PTPN12-212ENST00000494248 ATRNL1Q5VV63 1379 aa2.84□□□□□ -1.96
PTPN12-212ENST00000494248 IGKV2D-30A0A075B6S6 120 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 LINC01548A6NM66 108 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 PPEF2O14830 753 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 PHF2O75151 1096 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 PRSS23O95084 383 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 ASMTLO95671 621 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 ALOX15P16050 662 aaPredicted RBP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 PTPN7P35236 360 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 SREBF1P36956 1147 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 FOLR3P41439 243 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 SOX10P56693 466 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 GRM1Q13255 1194 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 PABPC4Q13310 644 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 SUPT20HL1Q3ZLR7 823 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 C4orf46Q504U0 113 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 RRP12Q5JTH9 1297 aaKnown RBP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 GJC2Q5T442 439 aaPredicted RBP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 CLEC4GQ6UXB4 293 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 NEK8Q86SG6 692 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 CCDC146Q8IYE0 955 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 TRMT2AQ8IZ69 625 aaKnown RBP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 SSH3Q8TE77 659 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 EVI5LQ96CN4 794 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 EBF3Q9H4W6 596 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 ZSWIM4Q9H7M6 989 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 ANLNQ9NQW6 1124 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 GEMIN8Q9NWZ8 242 aaKnown RBP2.83□□□□□ -1.96
PTPN12-212ENST00000494248 USP25Q9UHP3 1055 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 TBC1D30Q9Y2I9 924 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 COL4A3BPQ9Y5P4 624 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 RPTORQ8N122 1335 aa2.83□□□□□ -1.96
PTPN12-212ENST00000494248 CCDC151A5D8V7 595 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 FAM83GA6ND36 823 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 ZNF891A8MT65 544 aaPredicted RBP2.82□□□□□ -1.96
PTPN12-212ENST00000494248 EXOC5O00471 708 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 ADCY6O43306 1168 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 ORC4O43929 436 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 KPNA6O60684 536 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 ERN1O75460 977 aaKnown RBP2.82□□□□□ -1.96
PTPN12-212ENST00000494248 PAX3P23760 479 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 MPGP29372 298 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 POLGP54098 1239 aaPredicted RBP2.82□□□□□ -1.96
PTPN12-212ENST00000494248 TBX4P57082 545 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 HSD11B2P80365 405 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 SP140Q13342 867 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 BIRC2Q13490 618 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 TERF2Q15554 542 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 TCEA2Q15560 299 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 PLEKHG6Q3KR16 790 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 TMEM119Q4V9L6 283 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 WDR78Q5VTH9 848 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 CNNM4Q6P4Q7 775 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 MED25Q71SY5 747 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 YTHDF3Q7Z739 585 aaKnown RBP2.82□□□□□ -1.96
PTPN12-212ENST00000494248 SMC1BQ8NDV3 1235 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 SENP7Q9BQF6 1050 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 SH2D3AQ9BRG2 576 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 QTRT1Q9BXR0 403 aaKnown RBP2.82□□□□□ -1.96
PTPN12-212ENST00000494248 OSBPL2Q9H1P3 480 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 TMX1Q9H3N1 280 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 PRDM12Q9H4Q4 367 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 PCDH12Q9NPG4 1184 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 WWOXQ9NZC7 414 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 GABBR1Q9UBS5 961 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 WNT6Q9Y6F9 365 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 COMMD10Q9Y6G5 202 aa2.82□□□□□ -1.96
PTPN12-212ENST00000494248 PROM1O43490 865 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 PRC1O43663 620 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 PEX1O43933 1283 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 GPANK1O95872 356 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 POMCP01189 267 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 S100BP04271 92 aaPredicted RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 PTMAP06454 111 aaKnown RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 EPHB2P29323 1055 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 LGALS4P56470 323 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 RHBDL3P58872 404 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 IL2P60568 153 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 SLC10A2Q12908 348 aaPredicted RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 FOXD4Q12950 439 aaPredicted RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 OS9Q13438 667 aaPredicted RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 SQSTM1Q13501 440 aa2.81□□□□□ -1.96
PTPN12-212ENST00000494248 SF3B3Q15393 1217 aaKnown RBP2.81□□□□□ -1.96
PTPN12-212ENST00000494248 NBPF8Q3BBV2 869 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms