RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SNPHO15079 494 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TRAPPC3O43617 180 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TBCAO75347 108 aaKnown RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 SEC24AO95486 1093 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 LAMP2P13473 410 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 FSHRP23945 695 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 RPL9P32969 192 aaKnown RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 MCM4P33991 863 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 ACOT2P49753 483 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 GTF2BQ00403 316 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 ROR1Q01973 937 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 KCNA1Q09470 495 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TCF15Q12870 199 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TDGQ13569 410 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 MRPL58Q14197 206 aaKnown RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 SLC39A14Q15043 492 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 RRAGBQ5VZM2 374 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 ELMSAN1Q6PJG2 1045 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 ANKS3Q6ZW76 656 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 ALYREFQ86V81 257 aaKnown RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 SFR1Q86XK3 245 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 SLC44A3Q8N4M1 653 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TMEM105Q8N8V8 129 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 DDX12PQ92771 950 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 DNAJC19Q96DA6 116 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 SUSD3Q96L08 255 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 FGFBP2Q9BYJ0 223 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 PLEKHA5Q9HAU0 1116 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 EPS15L1Q9UBC2 864 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 DNMT3BQ9UBC3 853 aaKnown RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 FBXL5Q9UKA1 691 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 NUB1Q9Y5A7 615 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 TIMM13Q9Y5L4 95 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-219ENST00000494069 DOCK8Q8NF50 2099 aa9.3□□□□□ -0.92
LRCH3-219ENST00000494069 CITO14578 2027 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 OGTO15294 1046 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 PI15O43692 258 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 ADRB2P07550 413 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 CFHP08603 1231 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 NFICP08651 508 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 HNRNPA1P09651 372 aaKnown RBP eCLIP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 HOXB3P14651 431 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 NPR3P17342 541 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 ADSSP30520 456 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 LRPAP1P30533 357 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 CASP5P51878 434 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 JADE1Q6IE81 842 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 SLC8B1Q6J4K2 584 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 PDXDC1Q6P996 788 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 ZNF720Q7Z2F6 126 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 MAP4K3Q8IVH8 894 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 PDILTQ8N807 584 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 LINC00301Q8NCQ3 95 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 ZSWIM2Q8NEG5 633 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 STAMQ92783 540 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 SNX21Q969T3 373 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 MSTO1Q9BUK6 570 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 CPSF3Q9UKF6 684 aaKnown RBP9.29□□□□□ -0.92
LRCH3-219ENST00000494069 DUSP12Q9UNI6 340 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 NUMBLQ9Y6R0 609 aa9.29□□□□□ -0.92
LRCH3-219ENST00000494069 KMT2EQ8IZD2 1858 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 ANHXE9PGG2 379 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SYN3O14994 580 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SPTLC1O15269 473 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 ABLIM3O94929 683 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 OR4Q2P0C623 313 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 IDEP14735 1019 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 HOXA9P31269 272 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 STAT6P42226 847 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 CDR1P51861 262 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 WNT7BP56706 349 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 PPP2R3AQ06190 1150 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 HTR4Q13639 388 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 PKP1Q13835 747 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 STK38Q15208 465 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 CTXN3Q4LDR2 81 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SPATA1Q5VX52 437 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 CWF19L1Q69YN2 538 aaKnown RBP9.28□□□□□ -0.92
LRCH3-219ENST00000494069 ADALQ6DHV7 355 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 PARM1Q6UWI2 310 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 CRELD2Q6UXH1 353 aaPredicted RBP9.28□□□□□ -0.92
LRCH3-219ENST00000494069 RNF19BQ6ZMZ0 732 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 SIX5Q8N196 739 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 FLCNQ8NFG4 579 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 ZNF461Q8TAF7 563 aa9.28□□□□□ -0.92
LRCH3-219ENST00000494069 ING5Q8WYH8 240 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms