RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ABHD16BQ9H3Z7 469 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 MRPL47Q9HD33 250 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SCINQ9Y6U3 715 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 HSF2BPO75031 334 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 RWDD2BP57060 319 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 TMEM63BQ5T3F8 832 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 NAA35Q5VZE5 725 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 DPP9Q86TI2 863 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 AFG1LQ8WV93 481 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 KRT35Q92764 455 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 MAML3Q96JK9 1138 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 IFT122Q9HBG6 1241 aa11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 UTP11Q9Y3A2 253 aaKnown RBP11.52□□□□□ -0.56
PHACTR4-204ENST00000493669 SLC15A5A6NIM6 579 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 ZEB2O60315 1214 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 PHF2O75151 1096 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 CHRNA3P32297 505 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 ELMO3Q96BJ8 720 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 GDAP1L1Q96MZ0 367 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 VPS18Q9P253 973 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 AMACRQ9UHK6 382 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.57
PHACTR4-204ENST00000493669 UMODL1Q5DID0 1318 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ESYT3A0FGR9 886 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ZSCAN5CA6NGD5 496 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 AGPSO00116 658 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 RNF40O75150 1001 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 CST3P01034 146 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 GBP1P32455 592 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 GGCXP38435 758 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ADCYAP1R1P41586 468 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MYL6P60660 151 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 LRRC45Q96CN5 670 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 CYFIP2Q96F07 1278 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 RASAL2Q9UJF2 1139 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 GOLGA8KD6RF30 607 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 B4GALT5O43286 388 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 THAP12O43422 761 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 RRM1P23921 792 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 AMHR2Q16671 573 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 CYP1B1Q16678 543 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF699Q32M78 642 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 EEF1DP3Q658K8 133 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 PLEKHA7Q6IQ23 1121 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MTHFD1LQ6UB35 978 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 THNSL1Q8IYQ7 743 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MAIP1Q8WWC4 291 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 CPA5Q8WXQ8 436 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 HINFPQ9BQA5 517 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 TINF2Q9BSI4 451 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM124BQ9H5Z6 455 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ASB7Q9H672 318 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ADAM22Q9P0K1 906 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MROH7Q68CQ1 1323 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 H3BRB1 525 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MYO1FO00160 1098 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ECHS1P30084 290 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MAN1A1P33908 653 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 DRG2P55039 364 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 TFAMQ00059 246 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 DR1Q01658 176 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF410Q86VK4 478 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 CD302Q8IX05 232 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF606Q8WXB4 792 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 TUT1Q9H6E5 874 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 MINDY3Q9H8M7 445 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
PHACTR4-204ENST00000493669 ANK1P16157 1881 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 PROSCO94903 275 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CALB1P05937 261 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 GJB1P08034 283 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 MMP3P08254 477 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CYP2C19P33261 490 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 MARCKSL1P49006 195 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 IGBP1P78318 339 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 HLTFQ14527 1009 aaKnown RBP eCLIP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 DGKDQ16760 1214 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 GJC2Q5T442 439 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 SLC13A5Q86YT5 568 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms