RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 SKOR1P84550 965 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 PCBP1Q15365 356 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 ENOX2Q16206 610 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 MAPK6Q16659 721 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 FIGNQ5HY92 759 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 GNASQ5JWF2 1037 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 SLC39A4Q6P5W5 647 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 INTS8Q75QN2 995 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 RHPN2Q8IUC4 686 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 RNF149Q8NC42 400 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 NSMCE1Q8WV22 266 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 BHMTQ93088 406 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 SLC35B4Q969S0 331 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 ANKRD27Q96NW4 1050 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 TSEN34Q9BSV6 310 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 FZD8Q9H461 694 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 HMX1Q9NP08 348 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 PRMT7Q9NVM4 692 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 WBP1LQ9NX94 342 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 ZFATQ9P243 1243 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 MYO1AQ9UBC5 1043 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 HDAC6Q9UBN7 1215 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 ITGB1BP2Q9UKP3 347 aa7.75□□□□□ -1.17
SMARCE1-211ENST00000493660 ANK1P16157 1881 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 GTPBP10A4D1E9 387 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 SRRM3A6NNA2 597 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 LRRIQ3A6PVS8 624 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 ANKRD63C9JTQ0 380 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 NDUFAB1O14561 156 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 BUB1BO60566 1050 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 SMIM24O75264 130 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 NPTXRO95502 500 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 AFPP02771 609 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 PRKCBP05771 671 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 KRT13P13646 458 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 ZFXP17010 805 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 ALDH3A1P30838 453 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 CASP4P49662 377 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 INHBCP55103 352 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 SKIDA1Q1XH10 827 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 CCSAPQ6IQ19 270 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 WDR93Q6P2C0 686 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 USP37Q86T82 979 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 RNF180Q86T96 592 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 GPD1LQ8N335 351 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 C7orf31Q8N865 590 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 CCDC51Q96ER9 411 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 SETD4Q9NVD3 440 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 AKT3Q9Y243 479 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 DAAM1Q9Y4D1 1078 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 TRIM17Q9Y577 477 aa7.74□□□□□ -1.17
SMARCE1-211ENST00000493660 A0A1W2PQJ5 194 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 MOXD2PA6NHM9 499 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 GOLGA8KD6RF30 607 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 ACKR2O00590 384 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 FANCGO15287 622 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PMM2O15305 246 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 EXTL3O43909 919 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 STX10O60499 249 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 KRT38O76015 456 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PGK1P00558 417 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SRGAP2CP0DJJ0 459 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 CYP2C9P11712 490 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 ADSSP30520 456 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 GPC3P51654 580 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PSMD7P51665 324 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 MBTD1Q05BQ5 628 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 KCNH2Q12809 1159 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 BFSP1Q12934 665 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 TAF2Q6P1X5 1199 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PPFIBP1Q86W92 1011 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 KIAA0319LQ8IZA0 1049 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 ATP11CQ8NB49 1132 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 TMC2Q8TDI7 906 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 POMGNT1Q8WZA1 660 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SLC35C1Q96A29 364 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PPP1R14BQ96C90 147 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 EEF2KMTQ96G04 330 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 NLRP4Q96MN2 994 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PNKPQ96T60 521 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SH3GL2Q99962 352 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 CBWD1Q9BRT8 395 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SEZ6LQ9BYH1 1024 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 EDEM3Q9BZQ6 932 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 IKZF4Q9H2S9 585 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 ATXN10Q9UBB4 475 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 GTF2IRD1Q9UHL9 959 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 HPCAL4Q9UM19 191 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SIK3Q9Y2K2 1263 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PTCH2Q9Y6C5 1203 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 P4HA2O15460 535 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 TOM1L1O75674 476 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 VIMP08670 466 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 CCDC175P0C221 793 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 PROZP22891 400 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 SLC7A5Q01650 507 aa7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 POU5F1Q01860 360 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-211ENST00000493660 XRCC4Q13426 336 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms