RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 PLCB3Q01970 1234 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 KRT17Q04695 432 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 SOX4Q06945 474 aaPredicted RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 MORC3Q14149 939 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 HSP90AA2PQ14568 343 aaPredicted RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 TMEM132DQ14C87 1099 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 NAB2Q15742 525 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 PTPN21Q16825 1174 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 PLPP4Q5VZY2 271 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 TMEM184AQ6ZMB5 413 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 CD302Q8IX05 232 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 HASPINQ8TF76 798 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 C18orf25Q96B23 403 aaPredicted RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 IGSF21Q96ID5 467 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 UROC1Q96N76 676 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 TSG101Q99816 390 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 TCF25Q9BQ70 676 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 COLEC11Q9BWP8 271 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 KIAA1468Q9P260 1216 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
CTSA-209ENST00000493522 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
CTSA-209ENST00000493522 MTCL1Q9Y4B5 1905 aaKnown RBP12.55□□□□□ -0.4
CTSA-209ENST00000493522 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 F8W810 466 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 PSMA7O14818 248 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 ABCB7O75027 752 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 KIF4AO95239 1232 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 HOXB8P17481 243 aaPredicted RBP12.55□□□□□ -0.4
CTSA-209ENST00000493522 NR2F2P24468 414 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 CA8P35219 290 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 CLCNKBP51801 687 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 GUCY2FP51841 1108 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 SNRNP35Q16560 246 aaKnown RBP12.55□□□□□ -0.4
CTSA-209ENST00000493522 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 KLHL10Q6JEL2 608 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 ANKRD54Q6NXT1 300 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 TRIML1Q8N9V2 468 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 ASIC4Q96FT7 647 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 ASB7Q9H672 318 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 CTNND2Q9UQB3 1225 aa12.55□□□□□ -0.4
CTSA-209ENST00000493522 TRIM49BA6NDI0 452 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 PODXLO00592 558 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
CTSA-209ENST00000493522 PPP1R2P41236 205 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 WNT7BP56706 349 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 TFAMQ00059 246 aaKnown RBP12.54□□□□□ -0.4
CTSA-209ENST00000493522 POU5F1Q01860 360 aaKnown RBP12.54□□□□□ -0.4
CTSA-209ENST00000493522 TCF15Q12870 199 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 KCNC3Q14003 757 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 COBLL1Q53SF7 1204 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 FUT10Q6P4F1 479 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 TMEM130Q8N3G9 435 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 PDE11AQ9HCR9 933 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 ADAM28Q9UKQ2 775 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 DERAQ9Y315 318 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
CTSA-209ENST00000493522 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
CTSA-209ENST00000493522 TADA2AO75478 443 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 DLATP10515 647 aaKnown RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 CYP3A5P20815 502 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 PTMSP20962 102 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 BMP6P22004 513 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 CCNE1P24864 410 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 CASP4P49662 377 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 VCPP55072 806 aaKnown RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 CYP24A1Q07973 514 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 SURF1Q15526 300 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 UPP1Q16831 310 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 CCDC183Q5T5S1 534 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 LMBRD2Q68DH5 695 aaPredicted RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 SYCE2Q6PIF2 218 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
CTSA-209ENST00000493522 NT5DC4Q86YG4 428 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 SLC9A9Q8IVB4 645 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 VPS52Q8N1B4 723 aa12.53□□□□□ -0.4
CTSA-209ENST00000493522 C3orf58Q8NDZ4 430 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms