RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 CREB3O43889 395 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 HSF2BPO75031 334 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CCND3P30281 292 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 SDC4P31431 198 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 RPL9P32969 192 aaKnown RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 EIF4A3P38919 411 aaKnown RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 NOVP48745 357 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 ITKQ08881 620 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CYP4A22Q5TCH4 519 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 TSHZ1Q6ZSZ6 1077 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 SIAH1Q8IUQ4 282 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 DDX56Q9NY93 547 aaKnown RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 PRG3Q9Y2Y8 225 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 PCDHA13Q9Y5I0 950 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 PPP1R3GB7ZBB8 358 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 ZNF500O60304 480 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 ATP9AO75110 1047 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 FAM200BP0CF97 657 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 PTENP60484 403 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 FPGSQ05932 587 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 GRIK3Q13003 919 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 ZNF394Q53GI3 561 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 LMBRD2Q68DH5 695 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 USP49Q70CQ1 688 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 RBBP8NLQ8NC74 664 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 HPS3Q969F9 1004 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 HSD17B14Q9BPX1 270 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 FAM50BQ9Y247 325 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 PPP2R2CQ9Y2T4 447 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 QSER1Q2KHR3 1735 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 XYLBO75191 536 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 NNMTP40261 264 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 GTF2BQ00403 316 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CUL2Q13617 745 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 PSMD6Q15008 389 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CST9Q5W186 159 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 TAOK1Q7L7X3 1001 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 BRSK2Q8IWQ3 736 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 TNS4Q8IZW8 715 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CCHCR1Q8TD31 782 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 AGPAT1Q99943 283 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 RAB17Q9H0T7 212 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 MAGED2Q9UNF1 606 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 PCDHB2Q9Y5E7 798 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 IGLV3-22A0A075B6J6 115 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 F8W8V4 182 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 PODXLO00592 558 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 TCP1P17987 556 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 PSMC1P62191 440 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 MESDQ14696 234 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 NFE2Q16621 373 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 GOLGA7BQ2TAP0 167 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 FBXO47Q5MNV8 452 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 SYT10Q6XYQ8 523 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 ANKLE1Q8NAG6 615 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 EMID1Q96A84 441 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 MS4A4AQ96JQ5 239 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 MBOAT7Q96N66 472 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 SLITRK1Q96PX8 696 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 PDE11AQ9HCR9 933 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 UXTQ9UBK9 157 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ADAMTS5Q9UNA0 930 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 ST3GAL5Q9UNP4 418 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 TRAF3IP3Q9Y228 551 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 LRRC53A6NM62 1247 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 TLL1O43897 1013 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 RTN2O75298 545 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 B3GAT3O94766 335 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 HSPA1AP0DMV8 641 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 HSPA1BP0DMV9 641 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ARHGAP1Q07960 439 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 EFHC2Q5JST6 749 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 RBM41Q96IZ5 413 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 TRPC7Q9HCX4 862 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CAPN15O75808 1086 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CNMDO75829 334 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 FBXO21O94952 628 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 VDRP11473 427 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 GRM5P41594 1212 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CCL23P55773 120 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CCDC149Q6ZUS6 474 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 EFCAB13Q8IY85 973 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CCDC105Q8IYK2 499 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 SCFD1Q8WVM8 642 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 SYN2Q92777 582 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 PBKQ96KB5 322 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 ACO2Q99798 780 aaKnown RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 ABHD10Q9NUJ1 306 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 GTF2IRD1Q9UHL9 959 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 MCF2LO15068 1137 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 FGF19O95750 216 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 LCP1P13796 627 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 CA4P22748 312 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
NF1-215ENST00000493220 CAPSQ13938 189 aa6.67□□□□□ -1.34
NF1-215ENST00000493220 WHAMMP3Q1A5X7 153 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms