RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 THP07101 528 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 PBX1P40424 430 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 KLK7P49862 253 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 UBASH3AP57075 661 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 EPC2Q52LR7 807 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 KRT39Q6A163 491 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
CSTF1-206ENST00000493039 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 DPP3Q9NY33 737 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 LRFN2Q9ULH4 789 aa10.11□□□□□ -0.79
CSTF1-206ENST00000493039 SZT2Q5T011 3432 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PTPRSQ13332 1948 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PIRO00625 290 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PEX14O75381 377 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 LINC00271P0C7V0 271 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 SLC9A1P19634 815 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 MXI1P50539 228 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 TPM4P67936 248 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 HTRA4P83105 476 aaPredicted RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 NT5DC4Q86YG4 428 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 COLGALT2Q8IYK4 626 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 C3orf58Q8NDZ4 430 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 UBQLN1Q9UMX0 589 aaKnown RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 SIK3Q9Y2K2 1263 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 SLC4A7Q9Y6M7 1214 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 CITO14578 2027 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 TBKBP1A7MCY6 615 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 EPHB6O15197 1021 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 ITGB3P05106 788 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 CYP3A5P20815 502 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PON1P27169 355 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 KCNJ6P48051 423 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 UBXN1Q04323 297 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 GRIK3Q13003 919 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PAN2Q504Q3 1202 aaKnown RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 C9orf57Q5W0N0 161 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 USP37Q86T82 979 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 HERC6Q8IVU3 1022 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 PRO3102Q9H379 93 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 CWH43Q9H720 699 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 NRDE2Q9H7Z3 1164 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
CSTF1-206ENST00000493039 SIX2Q9NPC8 291 aa10.1□□□□□ -0.79
CSTF1-206ENST00000493039 CASTOR2A6NHX0 329 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 PES1O00541 588 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 SPTLC1O15269 473 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 P4HA2O15460 535 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 NOL4O94818 638 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 KIF4AO95239 1232 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ITGB1P05556 798 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ATP2A2P16615 1042 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 LRPAP1P30533 357 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 CLCNKBP51801 687 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 AP3M2P53677 418 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 MYL6P60660 151 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 NCOA4Q13772 614 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 UPP1Q16831 310 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ANKRD20A12PQ8NF67 263 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ANKRD36BP1Q96IX9 119 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 GTPBP10A4D1E9 387 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 LCHNA4D1U4 455 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 RNF225M0QZC1 329 aaPredicted RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 HOXA2O43364 376 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ASS1P00966 412 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TNNC2P02585 160 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 POLR2BP30876 1174 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 PBX3P40426 434 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ZNF75DP51815 510 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 MYL7Q01449 175 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TUSC3Q13454 348 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 BIRC3Q13489 604 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 SYCP1Q15431 976 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 ZC3H12AQ5D1E8 599 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 C1QTNF12Q5T7M4 302 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 SPOPLQ6IQ16 392 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 EHBP1Q8NDI1 1231 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 PHOSPHO2Q8TCD6 241 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TATDN2Q93075 761 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TRIM5Q9C035 493 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
CSTF1-206ENST00000493039 SLC38A7Q9NVC3 462 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 AGAP1Q9UPQ3 857 aa10.09□□□□□ -0.79
CSTF1-206ENST00000493039 TRANK1O15050 2925 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms