RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	PSPC1	Q8WXF1	523 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	CLEC4D	Q8WXI8	215 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	TRIM11	Q96F44	468 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	MFSD14A	Q96MC6	490 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	NT5C1B	Q96P26	610 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	INTS9	Q9NV88	658 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	TBX20	Q9UMR3	447 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	CNTNAP1	P78357	1384 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	ATP5D	P30049	168 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	GCNT1	Q02742	428 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	DSC3	Q14574	896 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	DLGAP5	Q15398	846 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	AADACL2	Q6P093	401 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	MIGA2	Q7L4E1	593 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	SLC47A2	Q86VL8	602 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	ZNF677	Q86XU0	584 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	MDM1	Q8TC05	714 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	DDX1	Q92499	740 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	ZNF653	Q96CK0	615 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	SERPINB12	Q96P63	405 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	NSRP1	Q9H0G5	558 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	PTPRH	Q9HD43	1115 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	SLC40A1	Q9NP59	571 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	HOMER2	Q9NSB8	354 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	HOMER3	Q9NSC5	361 aa		13.59	□□□□□ -0.23
PSMD11-205	ENST00000493026	CCT8L1P	A6NM43	557 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	YDJC	A8MPS7	323 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	TMEM110-MUSTN1	A8MSY1	372 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	TISP43	B9A030	160 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	DNM1L	O00429	736 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	GRIN3B	O60391	1043 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	TCEA3	O75764	348 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	ADRB2	P07550	413 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	MPST	P25325	297 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	SCTR	P47872	440 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	KRT76	Q01546	638 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	PTP4A2	Q12974	167 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	NBPF9	Q3BBW0	867 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	XRRA1	Q6P2D8	792 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	CCDC91	Q7Z6B0	441 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	TMEM161B	Q8NDZ6	487 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	LPAR1	Q92633	364 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	KAT5	Q92993	513 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	AZI2	Q9H6S1	392 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	LRRC4C	Q9HCJ2	640 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	COL20A1	Q9P218	1284 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	RGS17	Q9UGC6	210 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	ASTN2	O75129	1339 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	WDR64	B1ANS9	1081 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	DDX39A	O00148	427 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	BPNT1	O95861	308 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	CNGA1	P29973	690 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	ADSS	P30520	456 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	PEX3	P56589	373 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	AUH	Q13825	339 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	IPO4	Q8TEX9	1081 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	GRK7	Q8WTQ7	553 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	SEMA4D	Q92854	862 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	FBXO28	Q9NVF7	368 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	RAB20	Q9NX57	234 aa		13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-205	ENST00000493026	DYTN	A2CJ06	578 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	WDR46	O15213	610 aa	Known RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SLC16A4	O15374	487 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	RTP1	P59025	263 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	MRPS9	P82933	396 aa	Known RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	MAP2K1	Q02750	393 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	MTMR2	Q13614	643 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	PPP1R7	Q15435	360 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	CLEC16A	Q2KHT3	1053 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	PPP4R4	Q6NUP7	873 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	RHBDF2	Q6PJF5	856 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	RNF207	Q6ZRF8	634 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	MAEA	Q7L5Y9	396 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	CBWD2	Q8IUF1	395 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	FUK	Q8N0W3	1084 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	LILRB2	Q8N423	598 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	AGBL1	Q96MI9	1066 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	EPAS1	Q99814	870 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	RBCK1	Q9BYM8	510 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SAMD15	Q9P1V8	674 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	PPIP5K2	O43314	1243 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SCP2	P22307	547 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	ETFB	P38117	255 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	BPIFB4	P59827	614 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	IFI35	P80217	286 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	C1QBP	Q07021	282 aa	Known RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	DMP1	Q13316	513 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	PLPP7	Q8NBV4	271 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	IL31RA	Q8NI17	732 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	SELENOS	Q9BQE4	189 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	GINM1	Q9NU53	330 aa		13.57	□□□□□ -0.24
PSMD11-205	ENST00000493026	TCRBV7S2A1N4T	A0A589	114 aa		13.56	□□□□□ -0.24
PSMD11-205	ENST00000493026	NFIB	O00712	420 aa		13.56	□□□□□ -0.24
PSMD11-205	ENST00000493026	BACH1	O14867	736 aa		13.56	□□□□□ -0.24
PSMD11-205	ENST00000493026	DKC1	O60832	514 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PSMD11-205	ENST00000493026	GAS8	O95995	478 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms